Jeotgalicoccus sp. ATCC 8456: JEM45_03650
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Entry
JEM45_03650 CDS
T06966
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jea
Jeotgalicoccus sp. ATCC 8456
Brite
KEGG Orthology (KO) [BR:
jea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jea03032
]
JEM45_03650 (topA)
03400 DNA repair and recombination proteins [BR:
jea03400
]
JEM45_03650 (topA)
Enzymes [BR:
jea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JEM45_03650 (topA)
DNA replication proteins [BR:
jea03032
]
Prokaryotic type
DNA Topoisomerases
JEM45_03650 (topA)
DNA repair and recombination proteins [BR:
jea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JEM45_03650 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
CK_II_beta
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QQD85731
UniProt:
A0A7T4X2R5
LinkDB
All DBs
Position
complement(720464..722527)
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AA seq
687 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKRYKVVASMGHVRDLPRSQTGIDTENNYEPKYITIRGK
GPLLKDLKKEAKKAKKVFLASDPDREGEAIAWHLSHALGDNNDYYRVVFNEITKDAVKES
FKSPNEIDMQLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALKLIIDRENE
IRNFVPEEYWTIEGTFKTGRSKFTGKFNKLKRDKEKTKLKTKADVDNVLKELSGKDYLIE
KVEKKEKKRYPAQPFTTSSLQQEAARKLNFKARKTMMLAQQLYEGIDIKKEGTVGLITYM
RTDSTRISDSAKAEAYQLINDTYGKEYTGVQKEKKAAQDAHEAVRPTSANRTPENMKQYL
SRDQHRLYKLIWDRFIASQMAPAVLDTVKVDLSNNGVLFRSTGQTIKFKGFMTIYIEGTD
DAEDDLNNRLPELKEGETVTEEKIEPSQHFTQPPPRYTEARLVKTLEESGIGRPSTYAPT
IDTIQKRNYVRMDQKRFIPTEIGEIVNEQVVEYFPDIIDVAFTRNMEDSLDAVAEGEKEW
RQVIDEFYKGFEPQVERAEEEMEKIEIKDEPVGEDCEKCGSPMVYKMGRYGKFMACSNFP
ECRNTKAIVKSIGVTCPTCKEGDVVERKSKRGRIFYGCDKYPDCDFVSWDRPIGRNCPKC
EHYLVEKKKGQKAQVKCTNCDYTEDAS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacaatttagtgatcgtggaatcacccgcgaaagcaaaaacgattgaaaagtac
ctcggtaaacgatataaagttgtcgcatctatgggacacgtgagagatttaccacgtagt
caaactggaatcgacacagaaaataactatgaaccaaaatatataactatacgaggtaag
ggccccttactaaaagatttaaagaaagaagctaaaaaagcgaagaaagtatttctcgca
agtgaccccgacagagaaggagaagcaatcgcatggcatctcagtcatgcccttggtgat
aataatgattattaccgagtcgtcttcaatgagattactaaagatgcggttaaagaaagt
tttaaaagcccgaatgaaatagatatgcaattggtcgatgcccagcaggctagacgcatt
ttagatagactggtagggtataacatttctccagtcctatggaaaaaagttaagaaaggt
ttgtctgcaggacgtgttcaatcagtcgcacttaagctaattatcgaccgtgaaaatgaa
atcagaaactttgttccagaagaatactggacgatcgaaggcacctttaagacagggcgt
tcgaagtttactggtaagtttaacaagttaaagagagataaggaaaaaacgaaattaaaa
actaaagccgatgttgataacgtattaaaagagcttagtggtaaggattatttaatcgaa
aaagtagagaagaaagaaaagaaacgttacccagcacaaccattcacaacttcttctcta
caacaagaagcagcacgtaagttgaactttaaggcacgtaagaccatgatgctcgcccag
caattatatgaaggtatcgatattaaaaaagaaggtacagtgggtctgattacttatatg
agaactgactcaacacgtatctcagattcagctaaagcagaagcttaccaacttattaat
gatacttatggtaaagaatatacaggcgtgcaaaaggaaaaaaaagcagcccaagatgca
cacgaagccgtgagaccaacatctgctaatcgtacacctgaaaatatgaagcaatattta
agccgtgaccaacaccgtctatataaactgatttgggatcgttttattgcgagtcaaatg
gcaccagcagtgctcgatacggtaaaagttgatttgagtaataatggtgtgctgtttaga
agtaccggacaaacaattaaatttaaaggtttcatgacaatttatattgaaggcaccgat
gatgctgaagatgatttaaataaccgtttaccagaattaaaagagggtgaaacggtaaca
gaagaaaaaattgaaccttctcagcactttactcaaccaccaccaagatatacagaagcg
aggttagttaagactttagaagagtcaggtattggtagaccatcaacgtatgccccgaca
attgatacgattcaaaagcgtaactatgtaagaatggatcagaagcgatttatccctacg
gaaattggagaaattgtcaacgagcaagttgttgaatacttccctgatattatcgatgtt
gcctttacacgaaatatggaagatagtctagatgctgtagcagaaggcgaaaaagagtgg
cgtcaagtcatcgatgagttctataaaggcttcgagcctcaggttgaacgcgcagaagaa
gagatggagaaaattgaaatcaaggacgaacccgttggtgaagattgtgaaaaatgtggt
tcaccaatggtatacaagatgggccgttatggtaagtttatggcatgctctaatttccca
gaatgtcgcaatacaaaagccatcgttaaatcgattggtgtgacttgcccaacatgtaag
gaaggcgacgtggttgaaagaaaatctaagcgtggtcgaatcttttacggttgtgacaaa
tatcctgattgtgatttcgtctcttgggatcgcccaattggcaggaactgtccgaagtgc
gaacactacttagttgaaaagaaaaaaggacagaaggcacaggttaaatgtaccaactgt
gattacacagaagatgcaagttaa
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