Jeotgalicoccus sp. ATCC 8456: JEM45_09760
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Entry
JEM45_09760 CDS
T06966
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jea
Jeotgalicoccus sp. ATCC 8456
Pathway
jea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JEM45_09760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jea03019
]
JEM45_09760
03009 Ribosome biogenesis [BR:
jea03009
]
JEM45_09760
Enzymes [BR:
jea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JEM45_09760
Messenger RNA biogenesis [BR:
jea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JEM45_09760
Ribosome biogenesis [BR:
jea03009
]
Prokaryotic type
rRNA helicases
JEM45_09760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
DUF4468
Motif
Other DBs
NCBI-ProteinID:
QQD84884
UniProt:
A0A7T4X155
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All DBs
Position
1879111..1880607
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AA seq
498 aa
AA seq
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MKIFKELGISDETIQAITDMGFTEPTPIQEESIPLALERKDILGQAQTGTGKTGAFGIPI
VENTTKGAGTQVIVLTPTRELAVQVADQLKAFAKRKKLTTAVIFGGMSIERQIKDLKRKP
EIIVGTPGRMIDHINRRTLKLEDVQTIVLDEADEMMNMGFIDDVKFIMSKVPEEGRQTLL
FSATMPRAIQDLVTRFMKNPTVVKTMNQNNSDPLIDEFYTIVKELEKLSVFTSFLDVHQP
ELAIVFGRTKRRVDELTSALIAKGYRAEGLHGDITQSKRLEVLKKFKNNSLDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGMALTFVNPIEMDFLRQIENDKK
KAIRALRPPSKKEVEKAREQEVYEKIGKWLEENNNQHTGEIAEGLMTQHEPKAIIAALVN
ELLYSKEDDNIQLSFEKPLSRKGQGRRGKPNYSKGNHRGGNQRRGRDNFKSRGSKNNKRQ
GQGGRTSKQGRVFKDHER
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatttttaaagaattaggaatcagtgatgagacaatacaggccattactgatatg
gggttcactgaacctactcccatccaggaagaaagtattccattagcattagagagaaag
gatatccttgggcaagcacagactggtactggtaaaactggtgctttcggtatcccaatc
gttgaaaacacaactaaaggtgcaggtactcaggtgattgttctaacaccgacaagagag
ttagctgtacaagtagccgatcagttaaaggcatttgctaagagaaagaaattaacgact
gccgttatttttggtggtatgagcattgaacgtcaaatcaaagatttgaagagaaaaccg
gagatcatcgtcggaacgccaggacgtatgattgatcatattaatcgccgcacactaaaa
ttagaagatgtacagacaattgttttagacgaagcggatgaaatgatgaacatgggcttt
attgatgatgttaaattcatcatgagtaaagtacctgaagaaggccgtcagacacttcta
ttctctgcgacgatgccacgtgcaatccaagatctagtgacacgttttatgaagaatccg
acagttgtgaagacgatgaatcaaaataactcagaccctttaatcgatgagttttataca
attgttaaagagttagagaaattatctgtatttacatctttcttagatgttcaccaacca
gaacttgcgattgtttttggtcgtacaaaacgccgtgttgacgaattaacaagtgcatta
attgccaaaggttacagagctgaaggcttgcacggtgacattacacaatccaaacgactt
gaagtattgaagaagtttaaaaacaactctctcgatattttagttgcaactgatgttgca
gcaagaggtttagatatttcaggagtatcacatgtgtacaactttgatattccacaagat
actgaatcttatactcaccgtatcggtcgtacaggtcgtgcaggtaaagaaggtatggca
ttaactttcgttaacccaattgagatggatttcttacgtcaaattgaaaacgataagaaa
aaagcaattcgtgcccttcgtccaccaagtaaaaaagaagtggaaaaagcacgcgaacaa
gaagtctatgaaaaaattggtaaatggttagaagaaaataataaccaacataccggagaa
atcgctgaaggtcttatgactcaacatgagcctaaagcaattattgcagcactagttaat
gagcttctgtattctaaagaagatgacaatattcaattgtcatttgaaaaaccactttct
cgcaaaggtcaaggacgcagaggcaaaccaaattatagtaaaggtaaccacagaggtggt
aaccaaagacgtggtagagacaactttaaatcacgtggcagcaaaaacaacaaacgccaa
ggacaaggcggacgtacaagtaaacaaggtcgtgtatttaaagatcacgaaagataa
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