Jeotgalibaca ciconiae: EJN90_00905
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Entry
EJN90_00905 CDS
T05782
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJN90_00905 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jeh03019
]
EJN90_00905 (recQ)
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_00905 (recQ)
Enzymes [BR:
jeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJN90_00905 (recQ)
Messenger RNA biogenesis [BR:
jeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJN90_00905 (recQ)
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJN90_00905 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
PhoH
SecA_DEAD
SRP54_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AZP03340
UniProt:
A0A3Q9BIS3
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All DBs
Position
complement(183853..185676)
Genome browser
AA seq
607 aa
AA seq
DB search
MKTIQTVLEKNYGFDSFRPGQQQIIEAIMNKKDVLAIMPTGGGKSLCYQIPAICMEGTSL
VVSPLISLMKDQVDTLQAMGVRAGYINSQMDKSSYHDTMNKAMFGYYDLLYIAPERLDSE
HFMNVIQNMKINLIAVDEAHCISQWGQDFRPSYRNIPQLREAFDYPVPFAAFTATATTQV
KHDINKQLCLQNPHQYVASFDRPNLYFSVIPTKKKSTDLLKYINNSDSAIIYCNTRKNVE
TVYHSLVKKRFSVTYYHAGIPADERTKNQEDFIYDRKSIMVATNAFGMGIDKSNVRKVIH
YNMPLDMESYYQEAGRAGRDGAPSEAILLYSSQDIITNTFLIEQGNQPHAKDKLNRMISY
CKTGKCLRSYILGYFDEVPSWQKCEHCSNCDGNTETMDVTVESQKILSCIYRMNQRFGTG
MVTDVLRGKNNERIRSLNFNQLSTHGIMSDYNDNTIKDIISLLISEGFLSLSGDKYPILT
FTTKTNQLLKAEVTLSMTRKIVEDVRKSSKKEVADIHNYDESLFEKLRELRTKTAQEIGK
PPFVVFTDRTLIDMAAKLPLNDEEFLAIHGVGQSKLEQYGAEFLDIIQRHVSDTNIDVKK
ERAQNVL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaatacaaacagttctagagaaaaattatggatttgattctttccgaccagga
caacaacaaattattgaagcgattatgaataagaaagatgtattagcgattatgccaaca
ggtggaggaaaatctctgtgttatcaaattccagccatatgcatggaaggaacgagcttg
gtagtctcgccgttaatttctttgatgaaagatcaagtggatactttgcaggcgatggga
gtgagagctggttatatcaatagccaaatggataaaagtagctatcatgatacgatgaat
aaagcgatgtttggctattatgatttactttatattgcccctgaacgtctggacagcgaa
cactttatgaatgttatccaaaatatgaaaattaatttgattgcggttgatgaagcgcac
tgtatatcccaatggggtcaagattttaggccaagttatcgaaatatcccgcaattaaga
gaggcttttgattatcctgttccgtttgcagcattcactgcgacggcaacgactcaagta
aaacacgatatcaacaaacagctttgtttacaaaatccacaccagtacgttgctagtttt
gatcgaccgaatctttatttttcagtaatacctaccaagaagaagtctacggatttattg
aaatatatcaataattctgactcggcaatcatttattgtaatacgagaaagaatgtggaa
accgtctatcatagtttagtaaaaaaaagattctcggtaacttattatcacgcaggtatt
cccgctgatgagcgtactaaaaatcaagaagactttatttatgatcgcaaatccatcatg
gtggcaaccaatgcatttggaatgggaatcgataagtcgaacgtacgaaaagtcatccac
tataatatgccgcttgatatggagagttattatcaagaagcagggagggctgggcgagat
ggagctccttccgaagcaattctcttgtattcgagtcaggatattattacgaacacattc
ttgattgagcagggtaatcagccgcatgccaaagacaaattaaaccggatgatctcctat
tgtaaaacgggaaaatgtttgcgcagttatatactgggttactttgatgaagtcccttct
tggcagaaatgcgaacattgctcaaactgtgatgggaatacggagacgatggatgtcact
gttgaaagtcaaaagattctatcttgtatttatcggatgaatcaacgcttcggaacagga
atggtaaccgatgttttacgagggaaaaataatgagcggatacgaagtttgaattttaat
cagctttccacccatggaatcatgtctgattataacgataatacaattaaagatattatt
tcgttattaataagcgaaggatttctttctctttctggagataagtatcccattttgacg
ttcacaacaaaaacaaatcaattgctgaaagcagaagttacgctgtcaatgactcgtaaa
attgttgaagatgtccgaaaatcatcgaaaaaagaagtggcggatattcataattatgat
gaaagtctttttgaaaagcttagagaacttcgtacgaaaactgcgcaagaaattggaaaa
ccgccttttgttgtttttacagatcgaactttgattgatatggccgcaaaactaccttta
aatgatgaggagtttttagctattcatggagttggccaaagtaaactcgagcaatatggc
gctgagtttttggatatcattcaacgacatgtgagcgatacaaatatagatgtaaaaaaa
gaaagagcccaaaatgttttgtaa
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