Jeotgalibaca ciconiae: EJN90_01700
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Entry
EJN90_01700 CDS
T05782
Name
(GenBank) damage-inducible protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh03420
Nucleotide excision repair
jeh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJN90_01700
03430 Mismatch repair
EJN90_01700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_01700
Enzymes [BR:
jeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJN90_01700
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJN90_01700
MMR (mismatch excision repair)
Other MMR factors
EJN90_01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_16
AAA_14
SLFN-g3_helicase
AAA_30
PhoH
ResIII
DEAD
T2SSE
UvrD_C_2
NACHT
FtsK_SpoIIIE
AAA_7
DpnI_C
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AZP03487
UniProt:
A0A3Q9BKP4
LinkDB
All DBs
Position
complement(356197..358560)
Genome browser
AA seq
787 aa
AA seq
DB search
MLRKKRLDIYILIMKGDYPMVRNENLELEKEQSRMDHVVSVIDKEIERLAYEYTEKLERQ
KELLKESSSIKINNSSNEAMWESSGELREFEQNLVIKSNELNQVQNRRAVLEKMQEDPYF
GRIDYHNVNEKEEEQIYVGIGSLFDKEENLIVDWRAPISALYYEGNVGDRVKLRFGEHIE
AFEVDLKRQFRVRNATITGMIDTDNVMGDPYLLEVLESSSSNLMGPVIATLQKEQNRIVR
ESTSKNVLIQGVAGSGKTVVMMQKIAYLLYAYRNFLKAEDILLFSPNRIFQAYISQVLPS
LGEWDVAGNTFSQFITRRLPSFSLKRSDVGAASSYGAVKGSLPFYDALQRYSRLLKKKHL
KFRDIVLHDEVLISKEEIEYYYETIHSQGSLAAKLEILRVQLLQKLEILKEEAVDAEWVD
EELQHLSAASMHQFERQTHDITKMEGNIRKEIVAKAFLTVEKKINSQSHIRFLAQYIHFL
RVIPQLINLEEFNVSKDDWQEHVKEVVEMLKEKEFSMEDMTAYYALLLQMKGIMQQNSYQ
YICIDEIQDITPFQLKLLKDLYPRAKYVMAGDLNQNIWQNRLSNQELHQIFKEEEIESHL
LLTSYRSTREIMAFADQFASLPERTAKPIRSREKPAVFYANQTDFSEKIRQTILSRIEKG
ERIAFLSPTIKGAESFASYLDDWNIDYQKIYDENDFLNKQVILMPISLAKGLEFDVAIGL
GTDEILKGLSKESYQQIWYTIFSRAMHQLYLVVSNEQTELLKGIDPSTYLHGQETIEVEG
GSSNLNK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcaaaaaaagattagacatatacatattaattatgaaaggagattacccaatg
gtaaggaatgaaaatcttgaattagaaaaagaacaaagccgtatggatcatgtagtctct
gttattgataaagaaatagaaagacttgcatacgagtatacggaaaagttagaaagacaa
aaagaacttctgaaagaatcatcgtctattaaaataaataatagctcgaatgaagcaatg
tgggaatcttcaggagaacttcgagaatttgaacagaatttagtaatcaaaagtaacgaa
ttgaatcaagtacaaaatcgaagagccgtacttgaaaaaatgcaggaagatccatatttt
ggtcgaattgattatcataatgtgaatgaaaaagaagaagaacaaatttatgtagggatt
ggttccctttttgataaagaagagaacttgattgtcgattggcgtgctcctatttctgca
ttgtattatgagggaaatgtgggagatagggtaaagcttcgcttcggagaacatatagaa
gcctttgaagtggatttaaaaagacaatttcgagtgagaaatgctaccataacaggaatg
attgatacagacaatgttatgggagatccttatttacttgaagtattagagtctagttct
tccaacctaatggggccggtaattgcgacacttcaaaaagaacaaaatagaattgtacgt
gagtctacatctaaaaacgtccttattcaaggggtagcgggctcgggtaaaacagtcgta
atgatgcagaaaattgcttatttactctatgcttaccgcaattttttaaaggcagaggat
attctacttttctcgccgaatcgaattttccaagcatatatttctcaggtactgccgtct
ctaggtgaatgggatgtagcagggaatacgttctcgcagtttattactagaaggcttccc
tcattttcgttgaagcggtcagatgtaggagcagcatcttcatacggagctgtaaaagga
agcttgccattttacgatgctttgcaacgctatagtcgtttgcttaagaaaaaacatctc
aaattccgtgatattgttttacacgacgaagtactgatctcaaaagaagaaatcgaatat
tactatgaaaccatccatagtcaaggttcactagcggctaaattagagattttgagggtt
caacttcttcaaaagctagaaatattaaaagaagaagcagtggatgcagaatgggtagac
gaagaactgcaacatttatcggcagcaagtatgcatcaatttgaaagacagacgcatgat
attacaaagatggaaggaaatatccgaaaagaaattgttgcgaaagctttcctgacggtc
gaaaagaaaattaacagtcaaagtcatatacgttttttagctcagtacattcatttttta
agagtcattcctcagttaattaacttagaagaatttaatgtcagcaaggatgattggcaa
gaacatgtaaaagaagtagttgaaatgctaaaagaaaaagagttttcaatggaagatatg
acggcctactatgcattattgctccagatgaaaggaattatgcagcagaattcttatcag
tacatctgtattgatgaaatccaagatatcactccattccagttaaaactgctaaaagac
ctttatccaagagcgaaatatgtgatggctggcgatttaaatcaaaatatttggcaaaat
cgtttaagtaatcaagaattacatcagattttcaaagaagaggaaattgagagtcattta
ttactcacaagttatcgctctacaagagaaataatggcgtttgctgatcaatttgctagc
ttgccggaacgaacagcaaaaccaattcgttcaagggaaaagccagctgtattttacgcg
aatcagactgatttttcagaaaaaataagacaaaccattctttctagaatcgagaagggg
gaaagaattgcgttcctgtcaccgaccattaagggtgcagaatcctttgcttcttatcta
gatgactggaacatcgattaccaaaaaatatatgatgaaaatgatttcttgaacaaacaa
gtaattttgatgccgattagtttggcaaaaggattagaatttgatgtagcaataggatta
ggtacggatgaaatcttaaaaggactttcaaaagaaagttaccaacaaatttggtacaca
atctttagtcgtgcgatgcaccaattatatttggtcgtttcaaacgaacaaacggaacta
ttaaaaggaattgatccatctacttatttgcatggacaggaaactattgaagttgagggt
gggagcagcaatctgaataagtaa
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