Jeotgalibaca ciconiae: EJN90_07475
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Entry
EJN90_07475 CDS
T05782
Name
(GenBank) exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh00040
Pentose and glucuronate interconversions
jeh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EJN90_07475
Enzymes [BR:
jeh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
EJN90_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3
Pel9A-like_beta_helix
TCTP
Motif
Other DBs
NCBI-ProteinID:
AZP04483
UniProt:
A0A3Q9BML5
LinkDB
All DBs
Position
1574737..1578921
Genome browser
AA seq
1394 aa
AA seq
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MRIKSLINCSKVSLSLLLISQALLPTIVQAVELESSENISETEGLMEENVTDVISSYERE
LPIATITSDWSGTVFGDVGGQDKIVRENFEITENMDGTVKVKSANNRGKISGSTDGIAYY
FQEIPTNADFEFHATAYVENFDANNQVSFGIMLRDEVYDYVNGTEYASGNHLSVGALDQT
MKAFTREDGSLNKLHTFAGGSHSPNSGQSFDLSVKKMGSLFVLQVNGEEKIMEDYTGAVQ
YAGLFTSRNTEIIYSNLVLNVQESDESRYITELEVDSSEVKTTYLVNEELDLSALEVAAH
YSDGTTEVIAAGDYLVTGFDSSVAGTNTIKIHYGGISTELNLNIEALMVTDLRIVYLPAR
TEYYLGDSFEEKGLIVEAEYNNGEIARLSREQYDIEVASLLEVPGEQIVTVISKETPTET
AHFTIHVNEAELVQIEITKKPQKERYFLGETLDLDGMIVYAHYQDGTALRLMRNEYTVAE
LDTTTPGIKNLTVTHKGMEASFELLVKEKEFIGIAVQDYPKTTYTVGEVFIPDGLTVVKQ
YDNGDTELVSEEEYQLVVPSFSEAGTYRIEIQPSDPSITPVTLPVTIIDEVSYEWHAMRF
GQSTSNEKNTVTVNEDGTVDIVALEGGGKVTGDHDGISFYYTEIDAAEDNFEISATIEVI
EYAKNPHDGQESFGIMARDAIGNANDSSVFASNIAAIGGYSGGTRETNGIQLFTRTGVES
FDGAGSQGIHSVMLDEHRPLGTYQLTLEKTNSGFIGSVNNGTEEMIFEPEILNVQDSKMY
IGFYTARLATIQVSDIDFTVTKMSTDAPKVDPPAIAIEPGFTFTSLQRTSVEDYELRLKA
NVDGILTVKQGQETIASDIEIQAGEEPAFATTLTDDYTNFSVTFLPDDTQFLTSYEKIVK
NFTVEKRTYEGDIIVSPEGDANGSGTIEDPLDIDTAIDFVNPGQKIIVQDGVYLRNAPLE
IKKYNDGTEEAMKYLFAAKGANPVFDFDQKTEGGILSGDYWHIKGIDFRRSAGNTKGFVI
GGSHNIIELAQFYENGDTGLQISRTDNSTNIEDWPSYNLMLNVTSFDNRDPSDNNADGFA
AKLTSGVGNVFRGAIAYNNIDDGWDLYTKSGSGEIGAVLIEDSIAFNNGFVSYEYDGRGD
GNGFKLGGEGIHVEHTIRNSYAFGNLAYGFTSNSNPGVIAENNIGFNNGSGNISFTTYPH
IPTDFTIDGFVSYQKDFTEKDNYPADLEAVNNYFFDGEVSRNSSGVQLSDENFESLEFVP
YERDEEGNIVWGTFLSFVPPVTDNPEEPENPEEGETPEGSEDPEGSDPIEEDEAGQPTDS
TDSTEQPDETNSEETNEITDKNTAKEQDDQMEEAKNEKLPYAGLAQSPLKAIGLAFLVIG
LGTLFFTQKRKAQE
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattaaatctttgataaattgttctaaggtttctttgtcgttgctgcttatttct
caagcattgttaccaactattgtgcaagcagttgaattggagagttcagaaaacatttcg
gaaacggaaggcttaatggaggaaaatgtaaccgatgtcatatcaagctatgaaagagaa
ctaccaattgccacgattacgagtgattggagcggaacggtatttggtgatgtaggcgga
caagacaagattgtccgtgaaaactttgaaataacggaaaatatggatggcactgtcaaa
gtaaaaagtgctaataaccgtggtaagatttctggaagcaccgatggaatcgcctattat
tttcaagaaatacctacgaatgcagattttgaatttcatgcaaccgcctatgtagaaaac
ttcgatgccaataatcaagtttcttttgggattatgttgcgagatgaagtttatgattat
gtaaatggaacggaatacgcaagtggtaatcatctttcggttggagccttagatcaaacg
atgaaggcttttacaagagaggatggaagtttaaataaattacatacattcgctggagga
agtcattctcctaattctggacaaagttttgatttaagtgtcaagaaaatgggtagtttg
tttgttttgcaagtgaacggtgaggaaaaaattatggaggattatacaggagcagttcaa
tatgcaggactgtttacctctcgaaatacagaaattatttatagtaacctagttctgaat
gttcaagaatcagacgaaagtcgttacataacggagctagaagtcgatagcagtgaagta
aaaaccacgtacttagtgaatgaagaattagatctgtctgctttggaagtagcagcacat
tattctgatggaacaacggaagttatagctgcaggagattatcttgttacaggttttgat
agtagcgttgcaggaacaaatacaataaagattcattacggaggaatatcaacagaacta
aacctcaacattgaagctttaatggtcacagatttacgtatcgtttatcttccagccaga
acagaatattatttaggagactcatttgaagaaaagggcttgattgtagaagctgagtat
aacaatggtgagattgctcgcttatctcgtgaacaatatgatattgaagtagctagtcta
ttagaagtgccgggtgagcagattgtaacggtcatttcaaaggaaacaccaactgaaact
gctcattttacaatccatgtaaatgaagccgagttggttcaaatagaaattactaaaaag
cctcaaaaagaacgttattttctcggtgagacgttagacttggatggcatgattgtttat
gctcattaccaagatggaactgctttacgcttaatgagaaatgaatatacggttgcagaa
ctggatacaacaacgcctggaataaaaaacctaacagtaacacataaaggaatggaggct
tctttcgaattgctagtaaaagagaaagaatttattggaattgccgttcaggattatcca
aaaacgacttatactgtaggggaagtatttattcctgatgggctgactgttgtaaagcaa
tatgacaatggggatactgaactggtaagcgaagaggaatatcaattggttgttccttct
ttcagcgaagcagggacctatcggattgaaatccagccaagtgatccaagtattacaccg
gtaactttgcctgttactataattgatgaagttagttatgagtggcacgcaatgcgattt
gggcaatcaacttctaatgaaaaaaatactgttacagtaaacgaagatggtacggtagat
attgttgctttagaaggcggagggaaagtcacaggtgatcatgatggtatctccttctat
tatacggagattgatgcagccgaagacaactttgaaataagtgccaccatcgaagtgatt
gaatatgctaaaaatccccacgatggtcaagaatcatttggtattatggctcgagatgct
atcggaaacgcaaatgattcaagcgtatttgcatcaaatatagcagcgattggcggatat
agcggcggaacacgagaaacaaatggcattcaactattcacacgtactggtgttgaatct
tttgatggtgcaggaagccaagggattcatagtgtgatgctggatgaacatcgtcccctt
ggaacctaccaattaacattggaaaagacaaacagtggttttattggaagtgtgaataat
ggaactgaagaaatgatttttgaaccagaaattttaaatgttcaagattctaagatgtat
attggtttttatacagcacgtttggcaaccattcaagtaagtgatattgattttacagtc
acaaaaatgtcaacagatgcaccaaaagttgatcctcccgcaatagcgattgaaccagga
ttcacattcacatcgttacagagaacatctgtagaggattatgagctacgattaaaagca
aatgtagatggaattttaactgtaaaacaagggcaagaaaccattgcatcagacatagaa
atacaagcaggagaagaaccagcctttgcaactactttaactgatgattatacgaatttt
agtgtaacattcttgcctgatgatacacagtttcttacgtcctatgaaaaaatcgttaaa
aattttactgttgaaaaacgtacgtatgaaggagatatcatcgtttcaccagaaggagat
gcgaatggaagtggaacaatagaagatccacttgatattgacacagcgattgattttgta
aatccgggacaaaaaatcattgtccaagacggtgtgtatttacggaatgcaccactagaa
atcaaaaaatataatgacggaacagaagaagctatgaagtatctctttgctgcaaaaggc
gcgaatccagtctttgactttgatcaaaagactgaggggggtatattaagcggggattat
tggcacataaaaggaattgatttccgtcgcagcgctggaaatacaaagggctttgttatt
ggtggaagccacaatattattgagcttgctcaattttatgaaaatggagatacaggattg
cagattagccgaacagataattctactaacattgaggattggccttcctataacttaatg
ttgaatgttacttccttcgataatcgagacccatccgataataatgcagatggttttgct
gcgaagttgacctcaggtgtaggaaatgttttccgtggtgcaattgcctacaataatatc
gatgatggctgggacctttatacgaaatcaggaagcggagaaattggtgccgtgctcatt
gaagatagtattgcgttcaataatggctttgtatcttatgaatatgatggaagaggagac
gggaacggatttaaacttggcggtgaaggaatccatgtagaacataccattcgaaatagt
tatgcctttgggaacttggcttatggatttactagcaatagtaatccaggagtaatcgcg
gagaataatatcggctttaacaacggtagtggtaatatcagttttacaacgtatccgcat
ataccaactgacttcactatcgatggtttcgtttcttatcaaaaagattttactgagaaa
gataactatccagctgaccttgaagcggtaaataattacttctttgatggagaagtatca
agaaatagtagcggcgtgcagctatcggacgagaactttgaaagtttggaatttgttcct
tatgagcgtgatgaagaaggaaatattgtttggggaacgttcttatcttttgttcctcca
gttactgacaaccctgaagagcccgaaaatccagaagaaggggagacaccagagggttca
gaagacccagaaggttcagatccaatcgaagaagatgaagcaggacaaccaactgactct
actgactcgacggaacaaccagatgaaacgaattcagaagaaacgaatgaaataactgat
aagaataccgcaaaagaacaagatgaccaaatggaagaagcaaaaaatgaaaaacttcca
tacgcaggtttggctcaaagcccattgaaagcaattggcttggcattcctagtaattgga
ctgggtactttattcttcacccaaaaaagaaaagcacaagaataa
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