Jeotgalibaca ciconiae: EJN90_11130
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Entry
EJN90_11130 CDS
T05782
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJN90_11130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_11130
Enzymes [BR:
jeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJN90_11130
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJN90_11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
SLFN-g3_helicase
AAA_12
nSTAND3
T2SSE
AAA_28
Helicase_RecD
UvrD-helicase
AAA_17
AAA
AAA_5
AAA_29
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AZP05764
UniProt:
A0A3Q9BMI7
LinkDB
All DBs
Position
2390591..2393011
Genome browser
AA seq
806 aa
AA seq
DB search
MGEQPYILGEIKAVFFENPSNFYKVLLIELHENNFPFDKDEIVVTGNFGDITLDTVYRFL
GTTVAHPKYGTQFQAISYEREKPTGKNGVIAFLSSDRFPGIGQRTAEKIVETLGEGAIDK
ILNDADCLKEVAGLNEKKRTVVSEVLQEVQGTEKIIIELANLGFTNNQAATIMQFYKSDT
LKTIRENPYQLIEDIEGIGFRRADQLAMELEIGPDDKNRIKGAVLATIQDLSLSNGDTYV
DSNELLDKSLQLLENTRRFVIDEHLLIESVVEMVQDMKIVEDNKRFALPSLFFAEEGIAS
TLDRLLKKNREIEYPGVPIEKEIEKMQAKLNIQYDKVQTDAIYQALTTPFFILTGGPGTG
KTTVLNGIVHMFCELNGLPANSLEYTEGIYPIIMAAPTGRAAKRMNEMTGIPSSTIHRLL
GLTGQENPNDDLYTQELEGKLLIIDEASMVDTWLMNRLLKSIPAGMQVIFVGDKDQLPSV
GPGQVLFDLLNSRVIPHIELRQIYRQADGSSIIPLAHEIKEGQLPGDFTRNQSDRSFFPC
NASQIEPLIRVVVEKAKAKGFTSKDIQILAPMYKGPAGINALNNMMQEILNPNPNKQRRE
VQHFDFVYRVGDKVLQLVNQPELNIFNGDIGEIVSIQYAKETEDKVDEITIVFDSVEVTY
KKNDWNKFTLAYCCSIHKAQGSEFSMVILPMVRQYGRMLKRNLLYTAVTRSKSKLILCGE
IDAFDFAIKNTGDLRKTMLIEKLVRNKNSDKIIVEVPKTIEESSKEKNEEKQKQPANYLL
TVELVRSAGIDPLIGMEGITPEQFMK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacagccgtatatattaggagagatcaaagctgttttctttgaaaatccttct
aatttttataaagttcttttaattgaacttcatgaaaataattttcctttcgataaagat
gaaatagttgtgactggtaattttggcgatattacgttagatactgtataccgtttttta
gggactactgtagcgcatccaaaatacggtacacaatttcaggcaatcagttatgaaaga
gagaaaccaactggtaaaaatggcgtgattgcttttttgtcgagtgatcgtttcccaggg
attgggcagcgtacagctgaaaaaattgttgaaaccctcggtgaaggggctattgataag
attttaaatgatgctgattgtttgaaagaagtcgctggattaaatgaaaaaaaacgaacg
gtagtctctgaagtcctgcaagaagtacaagggactgaaaaaataattattgaacttgca
aaccttggatttacaaataatcaagctgcaaccattatgcaattttacaaatcggatacg
ttaaaaacaattagggaaaatccctatcaattgatcgaggatattgaagggattggcttt
cgaagagctgatcaattagcgatggagctggagattggtccggacgataaaaatcggatc
aagggagctgtattggcaacgattcaagacctttctttatcaaatggggatacctatgta
gatagcaatgaattgttggataaatctttacaattattggaaaacacacgacgatttgtt
attgatgaacacctactgattgaatcggttgttgaaatggttcaagatatgaaaattgta
gaagataacaaacgatttgctttaccatctttattctttgctgaagaaggaattgcttct
actttggatcgattgctgaaaaagaatagagagattgaatatcctggcgttcctatcgaa
aaagaaatcgaaaaaatgcaagcaaagctaaacatacagtacgataaggttcagacagat
gcgatataccaggcattaacgactccttttttcattctgacgggaggtccgggaactgga
aagacgacagtattaaatggaattgtccatatgttttgtgagttaaacggtcttcccgca
aattctctggaatataccgaagggatttatccaattattatggcagctccgactggtcga
gctgcaaagagaatgaacgagatgacaggtatcccaagtagtacaattcaccgtctacta
gggttgacgggacaagaaaatccaaatgacgacctttatacacaagaattagaaggaaaa
ctgcttatcatcgacgaggcatccatggtggatacttggttaatgaaccgattgttgaaa
tcaataccggcaggcatgcaggtcatctttgttggcgataaagaccaactgccatctgtc
ggacccggacaagtattatttgacttgctaaacagccgcgtcatacctcatatcgaatta
cgtcaaatttaccgtcaagcggatggttcttcaatcataccgttggctcatgaaatcaaa
gagggacagttaccgggtgattttactcgtaatcaaagcgaccgttctttctttccttgt
aatgcaagccagattgaaccactcattcgagttgtagtagaaaaagcaaaagcaaagggc
tttacttcaaaagacattcaaatccttgcgcctatgtataaagggccagcaggaattaac
gcattaaacaatatgatgcaggaaattttgaacccgaacccaaataaacaaagaagagag
gtacagcattttgattttgtttatcgcgtaggagataaagtcttgcagctggtgaatcaa
cctgaattaaatatttttaatggtgacattggtgaaattgtaagcattcagtacgctaaa
gaaacggaagataaagtggatgaaataacgattgtattcgatagtgtcgaagttacctat
aaaaagaatgattggaacaaatttactctagcttattgttgttccattcataaagcacaa
ggtagtgagttttcaatggttatcttacccatggttcgacaatacggacgaatgttgaag
cgcaacttactttatacagctgttacacgcagtaagagtaaattgattttatgcggtgaa
attgatgcctttgattttgcaataaaaaataccggtgatttacgaaaaacgatgctgatt
gaaaagttagtccgtaacaaaaatagtgataaaataattgtggaagttccaaaaaccatt
gaagagtcatcaaaggagaagaatgaggaaaaacaaaagcagccagctaattacctcttg
acagtagaattagtgagaagcgccggtatcgatcctttaatcggaatggaaggaattact
cctgaacaatttatgaaataa
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