Jeotgalibaca ciconiae: EJN90_11310
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Entry
EJN90_11310 CDS
T05782
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh03030
DNA replication
jeh03430
Mismatch repair
jeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJN90_11310 (holA)
03430 Mismatch repair
EJN90_11310 (holA)
03440 Homologous recombination
EJN90_11310 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeh03032
]
EJN90_11310 (holA)
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_11310 (holA)
Enzymes [BR:
jeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJN90_11310 (holA)
DNA replication proteins [BR:
jeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJN90_11310 (holA)
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJN90_11310 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
MRX9_C
NAD_binding_7
Hda_lid
DUF1848
Motif
Other DBs
NCBI-ProteinID:
AZP05179
UniProt:
A0A3Q9BLQ8
LinkDB
All DBs
Position
2431147..2432169
Genome browser
AA seq
340 aa
AA seq
DB search
MSYATEIAKIKKGVFSPVYLFLGTEMYFIQEARKTLLEYSMPAEDQDLNVGMYNMDEAPL
GNALEDAESIPFFGDRRVIIVDNPIFLTGEKPKGSVEHDIEWLERYLNHPSDTTILVFFA
PYEKLDNRKKISKLIQKKANVVNVSPLKDTETRQYLSKVIQNEGYQMDRQTVQFFFERIE
DNLSKGMDELQKLFLAAMDDKKITKRMVEDLVPRNLEQNIFDIVTYVLKKDVEKAIQTYR
DLLLQKEEPIKINAILLGQFRLLIQVKLLAKKGYQQPDMTKVLKIHPYRIKLANQQIRNL
NEKKLTDAYLGLVEAETKMKTGDGLKEVQFELFMLKYASA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgcaactgaaatagcaaaaattaaaaaaggtgtttttagtcctgtttatctt
tttttgggaacagaaatgtattttattcaagaggcaagaaaaactctattagagtattca
atgccggcagaagatcaagatttaaatgtcggtatgtataatatggatgaagcaccatta
ggcaatgctttggaagatgcagaatccatacctttttttggagaccgaagggtgataata
gttgataatcctatttttctaacgggagaaaaaccaaaagggagtgtggaacatgatatc
gaatggctagagcgctatttgaatcatccatccgatacaacgattttggtcttttttgcg
ccttacgagaagttggataaccggaaaaaaatcagcaaactcatacaaaaaaaggcgaat
gttgtcaatgtatctcccttaaaagacacagaaacgcgtcaatatttaagcaaggttatt
caaaatgaagggtatcagatggatcgccagactgtgcaattcttttttgaacgaatagaa
gataacctatcaaaaggaatggatgaattacaaaaattatttttagccgctatggacgat
aaaaagattaccaaacgtatggtagaagatttggttccacggaatttggaacaaaatatt
tttgatattgtaacttatgtgttaaaaaaggatgtcgaaaaagcaattcagacttatcgt
gatttacttcttcaaaaggaagagcccattaaaataaatgcgatcttgttagggcaattt
cgtttgctcatacaagtaaaattactagcaaaaaaaggctaccaacaaccggatatgaca
aaagttttaaaaattcatccttatcgaatcaagctggcaaatcaacaaatccgtaattta
aacgaaaaaaaattaacggatgcctatttaggactagtagaagcagaaacgaagatgaag
acaggggatggactcaaagaagttcagtttgaattgttcatgttgaaatatgctagtgct
taa
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