Jeotgalibaca ciconiae: EJN90_11320
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Entry
EJN90_11320 CDS
T05782
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
jeh
Jeotgalibaca ciconiae
Pathway
jeh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJN90_11320 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_11320 (uvrB)
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJN90_11320 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJN90_11320 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
AAA_7
AAA_25
P-loop_SecA
AAA_5
AAA_16
AAA
DUF87
Motif
Other DBs
NCBI-ProteinID:
AZP05181
UniProt:
A0A3Q9BN14
LinkDB
All DBs
Position
2432718..2434706
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AA seq
662 aa
AA seq
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MKDQFKLQSNYQPSGDQPEAIRELIKGLKENRKAQTLLGATGTGKTFTVANVIQEVNKPT
LVLAHNKTLAGQLYGELKEFFPNNAVEYFVSYYDYYQPEAYVPSSDSYIEKEASVNDEID
KLRHSATSSLLERRDVIVVASVSCIYGLVDPRNYKEHVVSIRKGMEISRNELLQRLVDMQ
FERNDIDFQRGRFRVRGDVVEIFLASRDSEAIRVEFFGDEIDRIREVDVLTGEIKNDVDH
FPIFPATHFVANEEQTLHAIDTIRAELKEQLAVLRADNKLLEAQRLEQRTNYDLEMLLEM
GYCNGIENYSRHMDGRKPGQAPYTLLDFFPDDYLIVVDESHMTMPQIRGMYNGDRARKQQ
LIDYGFRLPSALDNRPLRLEEFEDHVNQIIYISATPGPYEYEQSPYIAQQIIRPTGLLDP
VIEVRPIKDQIDDLISEINIRSEKNERVFITTLTKKMSEDLSDYLKEVGIKVKYLHSDIK
TLERTEIIRDLRLGEFDVLIGINLLREGLDVPEVSLVAILDADKEGFLRSERALIQTIGR
SARNENGKVIMYADRITDSMQKAIDETQRRRRIQEEYNEKHGIVPKTIIKEVRDLIRITH
IPEDIPAESNTMEIYKQMNREQRAVLIDELELEMRQAAKELNFEKAAELRDVVLELQTTY
KK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcaatttaaactacaatcaaattatcaaccaagtggtgaccaacctgaagca
attcgcgaattgataaaaggattaaaagaaaatcgaaaagcccaaactttattaggtgca
acaggaactggaaaaacctttactgttgccaatgttattcaagaagtaaataaaccgaca
ttggttttagcacacaacaaaacactcgcaggtcaattgtatggagaactaaaagaattt
ttccccaataatgcggtggagtattttgtcagttactatgattattatcaaccagaagct
tatgtaccttctagtgattcctatatagaaaaggaagcaagtgtgaatgacgagattgac
aaactgcggcattctgcaacgagttctttgctagagcgaagggatgtcattgtagtagct
tctgtatcttgcatttatggtcttgtagatccccggaactacaaggaacatgttgtttct
attcgaaagggaatggagatttctcgaaatgaattattgcaacggttagttgatatgcaa
ttcgaacgaaatgacattgattttcaacggggaagatttcgtgttcgcggagatgttgtc
gaaatatttctagcgtctcgcgatagcgaagcaattcgagtagagttttttggagatgaa
attgatcgtatccgagaagtagatgttctgacaggggaaataaaaaatgatgtggatcat
tttcctatttttccagcaacacatttcgttgcgaatgaagaacaaacactacacgctatt
gataccatacgcgcagaattaaaagaacaattagcggttttacgagcagacaataaacta
cttgaagcacaacgattagaacagcgtaccaattatgatcttgaaatgcttttagaaatg
ggctactgtaacggaatcgaaaattattctcgtcacatggatggacgaaagcccggtcaa
gctccctatacgctattagacttctttcctgatgattatttaattgttgtggatgagtca
catatgacaatgccgcaaatacgtggaatgtataatggggaccgcgctcgtaaacagcaa
ctaattgattatgggttccgtttgccgtcagcgctagataatcgtccgttgcgtttagaa
gaatttgaagaccatgtaaaccaaattatctatatatcggcaacgcctggaccatatgag
tatgaacagagtccttatattgctcagcaaattatccgtccaaccggattgttagatcca
gttattgaagttcgtccaatcaaagatcaaattgatgatttgattagtgaaataaacatt
cggagtgagaagaacgaaagagtgtttattacaactttaacgaagaagatgtcagaagat
ttatctgattatctaaaagaagtcgggataaaagtaaaatacctgcatagtgatatcaag
acgttagaaagaacggaaattatccgtgatcttcgtctgggagaatttgatgtgttgatc
ggaattaacttactgcgtgaaggcttagatgttccagaagtttccttggttgcaattttg
gatgcagataaagaagggtttttacgtagcgaacgagcgttgattcaaactattggccgt
tcagcgaggaatgagaatgggaaagtgattatgtacgcagatcgtatcactgattccatg
caaaaagcaattgatgaaacacagagaagacgcaggattcaagaggaatataatgaaaaa
catggaatcgtaccgaaaacaattataaaagaagtgcgtgatctcattcggattacacac
attccagaagatattccggcagaatctaatacaatggaaatttataaacaaatgaatcgg
gaacaacgtgcggttttaattgacgagttagagctagaaatgcgtcaagcggcgaaagaa
cttaatttcgaaaaagcagcagaacttcgagatgttgtattggagttacaaactacttat
aaaaagtaa
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