KEGG   Jeotgalibaca ciconiae: EJN90_12045
Entry
EJN90_12045       CDS       T05782                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
jeh  Jeotgalibaca ciconiae
Brite
KEGG Orthology (KO) [BR:jeh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jeh03032]
    EJN90_12045
   03036 Chromosome and associated proteins [BR:jeh03036]
    EJN90_12045
   03400 DNA repair and recombination proteins [BR:jeh03400]
    EJN90_12045
DNA replication proteins [BR:jeh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EJN90_12045
Chromosome and associated proteins [BR:jeh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EJN90_12045
DNA repair and recombination proteins [BR:jeh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EJN90_12045
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 HU-CCDC81_bac_2 HU-DNA_bdg ArAE_2 DUF6174
Other DBs
NCBI-ProteinID: AZP05311
UniProt: A0A3S9HD96
LinkDB
Position
2594640..2594918
AA seq 92 aa
MTNKAELVERVADKTNLTKKEVTATVDALFEVIQEALQSGEKVQVIGFGNFEVRDRAARK
GRNPQTGEEIQIEATKVPAFKPGKALKDAVKQ
NT seq 279 nt   +upstreamnt  +downstreamnt
atgacgaacaaagctgaattagtagaaagagttgctgataaaacaaaccttaccaaaaag
gaagttacagctacagtagatgcattatttgaagtaattcaagaagctttacaaagcggt
gaaaaagttcaagttatcggatttggtaactttgaagttcgtgaccgtgcggctcgtaaa
ggacgtaaccctcaaacaggggaagaaatccaaatcgaagcaactaaagttcctgctttc
aaaccaggtaaagcattgaaagatgcagtaaaacaataa

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