Jeotgalibaca ciconiae: EJN90_12645
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Entry
EJN90_12645 CDS
T05782
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
jeh
Jeotgalibaca ciconiae
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_12645 (addA)
Enzymes [BR:
jeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJN90_12645 (addA)
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EJN90_12645 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
YozE_SAM_like
ResIII
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AZP05426
UniProt:
A0A3S9HDH0
LinkDB
All DBs
Position
complement(2727061..2730852)
Genome browser
AA seq
1263 aa
AA seq
DB search
MAMIPPKTKNERFTDEQWQAIYQTGNNILVAASAGSGKTTVLVQRIIEKIKNGVNVDELL
VVTFTESAAVEMKERIRIAIQDAINAATTDEQYHHLLRQTTLLPQAYISTIHAFCLRVIQ
RFFYLIDIDPVFRIVADTIEVEMLKEDVWEELKEEQYGESGTFFKQLAKAYSNDRNDEGL
KELIFSLYNFSRANPNPRKWLSNLSNFYDMSNGLEKSDLYQNLLKPQIKRELEGTIYTLE
RAVHLAGDSETTDKHRELIAVERARLIEIQEAIIADEYQKAYELLKEFRFPRWPSTKKDN
PDKEIIQQMKQLRDQSKKEIGKLQENFFTRSLEEQEEIIEQTKPFIDEMIRVTTLFTEEY
WQQKLSDNALDFNDLEHLTLEILLPLRNGKRAPSEACFYYRGKFQEVLIDEYQDVNQLQE
SILFGVTRHQPETENLFMVGDVKQSIYAFRLADPGLFLQKYEKFAKNENGERIILAENFR
SRGEVISFTNFIFTQLMNKDVGQMEYDELAELKQGNKNFPNDSNAKTELLIYLKNSNKEE
EIPVTDEYTMQEDSELETYIDDKATGEVTMVAQKIRDLINKNTTIYDKKKKTDRMVQYKD
IVLLTPTKKNNLLILETFKEYGIPLILNDSQSFFQRTEITVILSLLKTIDNPRQDIPLAA
VLRSPIVGLNERQLAAIRLAQQSGDYYDSVQSFIKLYNEEEVDSSKENEDCYQKLTRFMN
QLNGWREYTKQNNLVQLIWRIYEETNFIDYVGGMSSGKQRVANLHALYERAKKYEATNYK
GLFQFVRFIERIQERDQDLAEPTTFSEDEDAVRIMTIHASKGLEFPIVFIMDMSKQFNMQ
DLRKSYIFSDKYGIGTDYVDVENRIKYPSLVTYAFANDKKKNLLAEEMRKLYVALTRAEQ
KIFLVGSYESKEKMWQEWGMADESFNRILPDHLRLSANNFMQWIGLALYRHQIIDPDSQI
KNYRGELSNYPVDFSISFMNSEDLLGNIVTVNLENEVDWDKKILSLVEDKAEKNRISIDF
ETAVKLMEAEYPHEAATQTTSYQSVSEIKRLFEDPDNAQLLQLEVGQQGDAGRFVEPRLS
RPKFLQEETIPTNAEIGTAVHYVLQNLTLGKPITEAHIKQLTNDLVEKGTIKENVAKRID
HSLILDFFETDLGKKVQEDASMVHQEVPFTMLMKAGNIFEGISPSSDDHLLIHGIIDGFI
EYSDEIILFDFKTDYVGENIEGVVSKYKGQMIVYRQALEQIKKKKVTQTYLCLLSTNQNI
LID
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgattcctccaaaaacaaagaatgaacgcttcacagatgaacagtggcaagct
atttatcaaaccggaaataatatccttgtagctgcttctgccggatcaggaaaaactact
gtattagttcaaagaatcatcgaaaagataaaaaacggtgtaaacgttgatgaattgctc
gtggtcacctttactgaatcagcagctgttgaaatgaaagaaagaattcgaattgccatt
caagatgcgattaacgcggcaacaacagatgaacaatatcatcatttattacggcagact
acactgttacctcaggcgtacatcagtaccattcatgctttttgtttacgtgttattcaa
cgttttttctacttgatcgatattgatccagtctttcgaattgttgcagacacaattgaa
gtagagatgttaaaagaagatgtttgggaagagttgaaagaagaacaatacggagaatct
ggaacgttttttaagcaattagcaaaagcctattccaacgatagaaacgatgaaggatta
aaagaattgattttttctttatataacttttctagagcaaatcctaatcccagaaaatgg
ctgtcaaatttgtcaaatttttatgatatgagtaatgggctagaaaagagtgatctctat
caaaatttactgaagcctcaaatcaaaagagagctggaaggaactatttatacacttgaa
cgagctgttcacttggcaggggattcagaaacaactgataaacatcgtgagttgatagca
gtagaaagagctaggctcattgagattcaagaagcgattattgctgatgaatatcaaaaa
gcctatgaattattaaaagaatttcgttttccaagatggcctagtaccaaaaaagacaat
cctgataaagaaatcattcaacaaatgaagcagttgcgtgatcaaagtaaaaaagagatt
ggaaaacttcaagaaaatttctttacacgctctttagaagaacaagaagaaatcattgag
cagaccaaaccatttatcgatgaaatgattcgagtaaccactctttttacagaggaatat
tggcaacaaaagctatcagacaacgcattggattttaatgatttagaacatttgacacta
gaaatattactgcctctgagaaatggaaaaagggcacccagcgaagcctgcttttattat
cgaggcaagtttcaagaagtgctgattgatgaataccaagacgtgaatcagcttcaagag
agtatactctttggcgtgacgaggcaccagcctgagacggaaaatttatttatggttggc
gatgtcaaacaatccatttatgcttttcgcttggctgatcctgggctatttttacaaaaa
tatgaaaaatttgctaaaaatgagaatggtgaacgaattattttagccgaaaattttcgt
tctcgtggagaagttatttcttttacaaattttattttcactcaattaatgaataaagat
gtgggtcagatggagtatgacgaacttgccgaattaaagcaaggaaacaaaaactttcca
aatgattcaaacgctaaaacagagctcttaatctatttaaaaaacagtaataaagaagaa
gaaattcctgttactgatgaatacactatgcaggaagacagtgagcttgagacctatatt
gatgataaagcaactggtgaagtaaccatggttgctcaaaaaatacgcgatttaattaat
aaaaacacgacaatctatgataaaaagaaaaaaacagatcgtatggttcaatacaaagat
attgtattgctaactccaacaaaaaagaataacttgttgattttggaaactttcaaggaa
tatggaattcctcttatattaaatgattctcaaagtttctttcagcgtacagaaataacg
gtaattttatcactattgaaaaccattgataatccacgacaagatattcctttggctgca
gtattacgttcgccgattgttggtttaaatgagcggcaattagcagccattcgacttgct
cagcaaagcggcgattattatgattccgttcaatcattcatcaagctctataacgaagaa
gaagttgattcttcgaaagaaaatgaagattgttatcaaaaacttactcgatttatgaat
caattaaatggatggcgtgaatacacaaaacaaaataatttggtgcaattaatttggcga
atttatgaagaaacaaattttattgactatgttggtggaatgtcttccggtaagcaacga
gtagcgaatcttcatgctttgtatgaacgtgcaaaaaaatatgaagctacgaactataaa
ggattatttcagtttgttcgctttattgaaagaatccaagaacgagaccaagatttagct
gagccaaccacttttagcgaagatgaagatgccgttagaattatgacgattcatgcaagc
aagggattagaatttccaattgtatttatcatggatatgtcaaaacagtttaacatgcag
gacttaagaaaaagctatatattctctgataaatatggcattggcacggattacgttgat
gttgaaaacagaatcaaatatccctccttagttacctatgcttttgcgaatgataagaaa
aaaaatctacttgcagaagaaatgagaaaattgtatgtagctttaactcgggcagaacaa
aaaatatttttagtaggttcgtatgaatcaaaagaaaaaatgtggcaagagtgggggatg
gccgacgaatcgttcaatcgtattcttccagaccatcttcgtttatccgctaataacttc
atgcagtggattggtctggcactttaccggcatcaaataatcgacccagattcacaaatc
aaaaattaccgtggagaattatcaaattatccagtcgatttttcaatttcatttatgaac
tctgaagatttattgggtaatattgtaactgtgaacttagaaaatgaagttgattgggat
aaaaaaattctttctttggtagaggataaagcagaaaaaaatcgaatatcaattgacttt
gaaacggctgtgaaactgatggaagcagagtaccctcacgaagcggctacgcaaacaacc
agctatcaatcggtatcagaaattaaacgtctctttgaagatcctgacaatgcgcaactg
ctccagttggaagtcggtcaacaaggagatgcaggtcgatttgtagagcctaggctttct
cgtccaaaatttcttcaagaggaaactattcctacaaacgctgagattggaactgctgta
cattatgttctacaaaatcttactttaggaaagccaattactgaagcacatattaaacaa
cttactaatgacttagttgaaaagggcacgataaaggaaaatgtcgcaaaacgaatcgat
cattcgcttattcttgatttctttgaaactgatttaggaaagaaagttcaggaagatgca
tcaatggttcatcaagaagttccttttaccatgttaatgaaagcagggaatatttttgaa
ggtatttcgcctagctctgatgatcatttattgatccatgggattattgatggtttcatt
gagtattcagatgaaatcattctttttgactttaaaactgattacgtcggggagaacata
gaaggagttgtttccaaatacaaagggcaaatgattgtttaccgacaagcgttggaacaa
attaaaaagaaaaaagttacgcaaacttatctgtgtttgctatctacaaaccaaaacatt
cttatcgattaa
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