Jeotgalibaca ciconiae: EJN90_12650
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Entry
EJN90_12650 CDS
T05782
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
jeh
Jeotgalibaca ciconiae
Brite
KEGG Orthology (KO) [BR:
jeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeh03400
]
EJN90_12650
Enzymes [BR:
jeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJN90_12650
DNA repair and recombination proteins [BR:
jeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EJN90_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
BORCS7
Motif
Other DBs
NCBI-ProteinID:
AZP05427
UniProt:
A0A3Q9BLU4
LinkDB
All DBs
Position
complement(2730821..2734513)
Genome browser
AA seq
1230 aa
AA seq
DB search
MKYDKIVNDIIIRKYSQLRKEDGCMTLQFIIGQGTADKRTEYIQDIKQIMNEQPDAKFFI
IVPEHAKFEGEMKILEKLWKSDEEEDSPFIGSINLQIFSFSRLAWFFLKDKEVFQKKRLS
DSGISMLLRKLLLDSKEEFILFRREIEKEGFIQQLTDLFKEFKAGNISVEDLEASISYQS
DSPRLLDQQQKIREILSIYKKYCTVVDENYIQYEFLLESLANCIYETNAENTYLYIDGYY
YFSAQELQIIQAFLHQAARVSVILDLDKAYVEGPPELTNLFHAAGSTYFQLYQFARSKNI
PILHDKKIVSQTDGYQEGIIQLDNYWIQSTSGSKQSPTLQLENKHFEKEIEIWSCDTKQA
EIFHIANSINRLVVEKGYRYKDFIILARRVEDYETILKPLFQKANLEVFYDKAEEMRHHP
FTDFIDSLFRVRFNYWRYPDIMRLLRTELLIPTVENNEDLSIKQKKELLKEYRDTIDKTE
NILLAYGYEGNAWFQKNEWSAYRFSEVDEELQSENQPLGMAEANKIKVFLQSRLLPFYKK
LQAVKTGREAATVIYQFLEKNRIDEQIIFWRDAAIEDNDLEKARQHEQLWKTFILLLDEY
VETLGDTPFDARTFHEILMTGFETATYSIVPPALDEVVFSSIEGARFQPAKVAFIIGATQ
ENLPKVHENRSLLTEEERETLQSTLQAENKYLSLSISESTASEPFIAYQAFLAATKKLYI
TYPLSVDGSTRIQKISPYIARISKDLNLSIQHKAADITDSSQPEDFIGSKVQNISQLVKL
IRNQFTTEDKMPFIWRNILSFLYRDKESVKVMERIFRSLKYKNIPEQLTPEIAEKLYGKN
LFLSVSQLESYYLDSYSHFLQYGLRLKERQKYELSPAGAGEFYHEALEHIVRRMAQADQL
SVDTVQKIAQEILVHLFGMDKYAILSSSNRMKFIQEQLNETIEHLSTIIYGQRSLTTFQN
VRTEAIFGPPGMENELEGMVFSLKNDRKLYLRGKIDRIDKIEKDGKQYLSVLDYKSSQHS
FDFIDAYYGLAMQMITYLDIAMLNADRLLASNAEPAGAFYLHVKNPLLKALIKPEEGEFK
KQLLSEHKLKGLLIAETELTKIMEPDVELGESALVLPFRYKKSGSFYSNVNDLVTREELD
LLIKNNRRRIQEAGNQILSGELKMNPVKDKLYIPSIQGPYRAISQFDSTLAENRYRRLEK
LDKSKVLQKLQEELEEGSERDGNDSSKNKE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgataaaatagtgaatgatatcatcattaggaaatactctcagttaagaaaa
gaggatggttgtatgactcttcaatttataatcggccaaggaacggctgataagcgaaca
gaatatattcaagatattaaacaaataatgaatgagcaaccagatgcaaagtttttcatt
attgtccctgaacatgcaaaatttgaaggtgaaatgaaaattctagaaaaactatggaaa
tcggatgaagaggaagatagtccttttatcggttccatcaatttgcaaatatttagtttt
agtcgtttagcatggttttttctaaaagataaagaggtttttcaaaagaaacgattaagc
gattctggaatcagcatgttattacgaaaacttttactcgattcaaaagaggaattcatt
ttattcagaagagaaatagaaaaagaaggattcattcaacagctgacagatctatttaaa
gaatttaaagcagggaatatttcagttgaagatttagaagcatctattagctatcaaagc
gattcgcccaggttactggatcaacagcaaaaaataagggaaatcctttcaatctataaa
aaatattgtacggttgttgatgagaattatatccagtacgaatttttattagaaagcttg
gcaaattgtatttatgaaacaaatgcagagaatacttatctctatattgatggttattat
tatttcagtgcacaagaactgcaaatcattcaagcgtttcttcatcaagcagctagagta
agtgttatattggatttagacaaggcttacgttgaaggtccgcctgaattaacaaatctc
tttcatgctgctgggagtacatactttcaattgtatcaatttgcaagaagtaaaaacatt
cctattcttcatgataaaaaaattgtttctcaaacagatggttatcaagaaggaattatt
caactggataattattggattcaatctacttctggaagtaaacaaagtcccactctgcaa
ttggagaataaacattttgaaaaagaaatcgaaatttggtcgtgcgatacaaaacaggca
gaaatctttcatattgctaatagtattaatcggctggtagttgagaaaggatatcgttat
aaagattttattattttagctcgacgcgtagaggattacgaaacaattctgaaaccgttg
ttccaaaaagcgaatttggaagttttctacgataaagcagaagaaatgaggcatcatccc
tttacagactttattgatagtttattccgtgtgcgctttaattattggcgataccctgat
attatgcgactgctgcggacagagttactgatacctacagtagaaaataatgaagatctt
tcaattaaacagaaaaaagaacttttaaaagaataccgtgatacgattgataaaaccgaa
aatatactgttggcatatggttacgaaggaaatgcttggtttcaaaagaatgaatggtct
gcctatcgtttcagtgaagtagatgaagagttacaatcagagaatcaaccacttggaatg
gcggaggccaataaaatcaaagtctttttacaatctcgcttattaccattttataaaaaa
ttacaagccgtaaaaactggcagggaagctgctacagtaatttaccaatttctggaaaag
aatcgaatcgatgaacaaatcattttttggcgtgatgccgctatcgaagataatgatcta
gaaaaagcgcggcagcatgaacagctatggaaaacatttatattactgttagatgagtac
gttgagacgttgggtgatactccttttgatgcgagaacattccatgagattttaatgact
ggttttgaaacagcaacttatagtattgtaccgcctgcattagatgaagtggttttttca
agtatagaaggcgctcggtttcaacctgcgaaagttgcttttatcattggcgcaacacaa
gaaaatttaccaaaagtccatgaaaatcgctctttattaacagaagaagaacgagaaaca
ttacaaagtactttacaagctgaaaataaatatttgtctctctcgatttcagagtctact
gcatccgaaccttttatcgcttaccaagcttttttagcggctacaaaaaaattatatatt
acttatccattaagcgtggatggcagtacacgaattcaaaaaatatccccttatatcgcc
cgcatttccaaagatttgaatttatctattcaacataaagcggcagatattaccgattca
agtcaaccagaagattttattggcagcaaggttcagaatattagtcaactggtgaagtta
ataagaaatcaattcactactgaggataaaatgccattcatctggagaaatatcctttcg
ttcttgtatcgagataaagagtctgtgaaagtaatggaacgtatttttagaagcttgaaa
tataaaaatatccctgaacaattaacaccggaaattgcagaaaaactttatggtaagaat
ctttttctttctgtttctcaactggaaagttactacttggattcctatagccatttcttg
caatatggtctgcgattaaaagaaaggcagaaatatgagctttctccagctggtgccggt
gagttctatcatgaagcattagagcatatagtaagacgcatggcccaagcagatcagtta
tcagttgatacagtccaaaaaattgcacaagaaattctggtccatctcttcgggatggat
aaatatgcgattttatcgagttcgaaccgcatgaagtttattcaagagcaattgaatgaa
acaattgagcatctctccactattatttatggtcagcgttcgctcactacttttcaaaat
gtaagaacggaagcaatctttggtcctccaggtatggaaaatgaattagaaggaatggtt
ttttcattaaagaacgaccgaaaactatatttaagagggaaaatcgaccgaattgataaa
attgaaaaagatggaaagcagtatttatctgtgctggattacaaatcaagccaacattct
tttgattttattgatgcttattatggattggcaatgcaaatgattacttatttagatatt
gcgatgttaaatgccgatcgattattagcttctaatgcagaacctgcaggtgctttttat
cttcatgtaaagaaccctttattaaaggcacttattaagcccgaagagggagagttcaaa
aagcagcttctttccgaacataaattaaaggggctgctaattgcagaaacagaactaacg
aaaataatggaaccggatgtagagcttggagagtctgctttggtattaccattccgttat
aaaaagtctggctcgttttattcaaatgtcaacgatttagtaactagagaagaattggac
ttattaataaaaaacaatcgtcgaagaattcaagaggccggtaatcaaattttatccggt
gaattgaagatgaatccagtgaaagataagctctacattccatccattcaaggaccctat
cgggcaatctctcaatttgatagtacattagctgaaaatcgatatcgacgattagaaaaa
ttagataaatcaaaagtattacaaaagcttcaagaagaattggaagaagggagcgaaaga
gatggcaatgattcctccaaaaacaaagaatga
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