Jeotgalibaca sp. MA1X17-3: LZ578_03870
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Entry
LZ578_03870 CDS
T08634
Name
(GenBank) polysaccharide lyase family 7 protein
Organism
jem
Jeotgalibaca sp. MA1X17-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase2
Beta_helix
F5_F8_type_C
NosD
F5_F8_type_C_2
Pect-lyase_RHGA_epim
CBM96
Gram_pos_anchor
DUF2420
Motif
Other DBs
NCBI-ProteinID:
UJF16276
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Position
772618..778185
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AA seq
1855 aa
AA seq
DB search
MRQKIGRVLLVLMLMLSSFNFAALVHGEENKKRYDIVDVWASGDDGNVIENTLDNISSTR
WASKADKEPQWAVYDLGEEKNVAKVGISFNNGDVRRTIFDIEVSNDKKEWVKLLDQTSTP
EEKATNDLVGFDVKDTTARYVRFTGYGYEFYDESKGSGDWISIFDFHIYGNDSDPLDPTL
NIEQEQRSALTYTQPGLVNADGSDHAEPVANVATTTIDVTKNGVDTSENDQSTAIQKLID
EAEVGTELYFPNGTYTIVEYLKMKDGVNLRGESREGTIFMATPSDSGYNDMLILMLGVED
VVISDITITADLVVDYEVDHTVNNPNADGLKVPIRIRDREGYLDLDTGIQLNKPSKNILI
KNVLIEKYQTMGIRVENSSDVVIDAAIFQNAMDLGGVGAGYGVSIQGAGNNRDRTGFSND
SKHNVVKNSQFIGPYLRHGVILQYYTHNNAIYNNVLTETKLDAIDIHGEDEYLNEIYGNT
IKDIKTGAGIAAGNTGATHDKSGPGNYIHDNTISNSREGIKIHLGTEDTIIENNTIIGST
VPNAKGIYLQNAPGTRVTGNTIKDNQSAGFYSVYMDYDNGTAATGQQARGFGIPYDIIIE
DNTFDNNTNGVYISSGRKIEYDNNTFTNISDQKIVDTRTKDYKESMLPTEILDLTNWKIN
TARYDESGTKPVEVKQPELEEFFDEDFYYVNAEQTGVVFNAPVDGATTPNSNYPRTELRE
MKNGGTEHADWSTAEGKHTMVIDQMVTSLPAVKNEVTVGQIHDADDDVVMIRLEAERLFV
QAEGVDLGTLESNYQLGTRFQVKIEAMNNIVYVYYNGELKVEYPVEKHGNYFKAGMYTQS
NLSKGDIKGAYGEVVIFGVTLEHDYDNVPTEPEKEIELPETDPTGTINAVMDTFIELTEE
EDTDGVKQPVANSEPKNSSNQLELKTSGSQKYIRMPIIQFNVANYDKDVASAELVLSKKS
LDKQDTTISVYATTEVLPEDITWANTEGLGVDSRINKGNTDVLDWLKSIQAEKVGEMEFA
LDENIMEHKMNVSKFVNKDLEEENITFILLDEAGVNTYLKLYSMEEEYAPTLNIWDTVGG
SDEDESEEGNLGVADEEVDATQDTYIELSSKVGNSETYNAKKTLDLKTSGGQTTIRMPII
EFDLMNSESIKAGKLGLSLASLDQDISVAVYATNQSLPADITWESIEGLNNDSRVTENKG
NTDVLDWITSVGGTKVGNIDFLAAGATEYTLDASEVLNEEFNGDQVTFILIDEEASNGYL
KLNSIESGNSAKLSIWNADPSEEPGEGTPEAKNYTLTFKVKDENDTYNEFHTADYEGSEE
AALEHGEGLAAKFADKYGEYTYEAVDNGFVFNFEGLEIEVPEVEVYTLTFKVKDEDGVYN
EFHTTDYESNEETALEYGESLATEFVALYGEYTYKAVENGFVFNFEGLEIETPEVELYTL
TFKVKDESDVYNEFYVVNYEGNEETALDYGEKLAVKFAEIYGDYIYETADNGFVFNFEAL
ENQVPEVEYSTLTFRVKDKNGIYNEFYVVDYEAKEETALAYGEKLAVLFAETNGEYMYEE
VENGYVFNFEGLEVEKYTLTFKVKDENEDYNEFYTAIYEGSEEAALEYGESLAILFAEVN
GDYNYERVENGYIFNFEGLEIEIPEVEIYTLTFKVKNKDGIYNEFYVFDYEGSVEKALEY
GETLADLFAETNGKYTSEKVENGYVFNFEGQSAEIPLIPLEPSIPVDPEDDVDPDGDTDP
EDETDADADDESNIGGGADIDDESNIGGGADADDKSNTGGEADLDDESDTNASSNKKPES
SEKPGKIEDKEKPSNSKEESLPETGTKRNIYSLLGMMVLVIGAAIVVYNKKSSKE
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaaagattggaagggttttacttgttttaatgttgatgctgagttcatttaat
tttgctgctttagttcatggggaagaaaataagaaacgctatgatattgttgatgtttgg
gcaagtggcgatgatggaaacgttattgaaaatacactagataatattagtagtacaaga
tgggcttctaaagcagataaagaaccccaatgggctgtttatgaccttggagaagaaaag
aatgtggcaaaggtcggtatctcgtttaataatggagatgtaagacgtaccatctttgat
attgaagtatctaatgataaaaaagaatgggtgaaactactcgatcaaacatctactcct
gaagaaaaagctacaaacgatttggttggatttgatgttaaagatacaactgctcgttat
gttagatttacaggatatggttatgaattttatgatgaatcaaaaggttctggagattgg
attagtatttttgacttccatatttatggaaatgacagtgatcctttagatccaacttta
aatattgaacaagagcaaagatctgctttgacttatacacaacctggacttgtaaatgca
gatggttcggatcatgcagagccagtagctaatgtagcaacgacaacgattgatgttaca
aaaaatggtgtagatacttctgaaaatgatcaaagtactgcaatccaaaaattgattgac
gaggctgaagtaggaacagaactatattttcctaatggaacgtataccattgttgaatat
ttaaaaatgaaagatggagtaaatcttcgtggagaaagtcgtgaaggaactatttttatg
gctacaccatccgattctggatataatgatatgcttattctgatgttgggtgtagaagat
gttgttatttcagatataacgattacggcagatttagttgtagactatgaagtggatcat
acagttaataatccaaatgctgatggattgaaagttcccatccggattagagatagggaa
gggtatctagatttagatacaggtattcaattaaataaaccttcaaaaaatattttgatt
aaaaatgtacttattgaaaaatatcaaacgatggggattcgtgttgagaatagttctgat
gttgttattgatgcagcaattttccagaatgcgatggaccttggtggcgttggagctgga
tacggagtatcgattcaaggcgcaggtaataacagagatcgtacaggatttagcaatgat
tccaagcataatgtggttaaaaatagtcaattcataggaccttacttacgtcacggcgta
attctacaatattatacccacaataatgctatttataataatgtgctaacggaaacaaaa
ttggatgcaattgatatccatggtgaagatgagtatttaaatgaaatttatggaaacacg
attaaagatataaagacaggtgctggaattgcagcaggaaatactggagcgacccatgat
aaatcaggtccaggaaattatatccatgataatacgatttctaattctcgtgaagggata
aaaattcacttaggtacagaagataccattattgaaaataatacgataataggatcaaca
gtccctaatgcaaaaggaatttatttacagaatgcacccggaacgcgtgtaacaggcaat
acaattaaagataatcaatcagcaggtttctattctgtttatatggattacgataacgga
acagctgctacagggcaacaagcgcgtggttttggtattccatatgacatcattatagaa
gacaatacatttgataataatacaaatggtgtttatatatcttctggtagaaagatagaa
tatgataataatacatttacaaatatttctgatcagaaaatagttgatacgagaacaaaa
gattataaagaaagcatgcttcctacagagattcttgatttaacaaattggaaaataaat
actgcaagatatgatgagagcggtaccaaaccagtagaagttaaacaaccagaactggaa
gagttctttgatgaagatttctattatgtgaatgcagaacaaacgggagttgtctttaat
gcaccagtagatggagctacaacgcctaactctaattatccaagaacggaacttcgtgaa
atgaaaaacggaggaacagagcatgctgattggtcaactgcagaaggtaaacatactatg
gtgattgatcagatggttacctctttaccagcagttaaaaatgaagtaacggttggacaa
attcatgatgcggatgatgatgtggttatgattcgtttggaagctgaaagattgtttgtt
caagcagaaggtgtcgatcttggtacattagaatcaaactatcaattaggaactcgcttc
caagttaaaattgaagcaatgaacaatattgtttacgtttactacaacggtgagttaaag
gtcgaatatcctgtagaaaaacatggaaattatttcaaagcaggtatgtatacgcaatca
aatctttcaaaaggcgacataaaaggtgcatatggtgaagtagttatttttggtgttact
ctagaacatgattatgacaacgtaccgacagagccagaaaaagaaatcgaacttcctgaa
acagatccaacaggaacaatcaatgcggtaatggatacgtttattgagttgactgaagaa
gaagatacagacggagtcaagcaacccgttgcgaactctgaaccaaaaaattcaagcaat
caattagagctgaaaacaagtggttcacagaagtatattcgtatgccaatcattcaattt
aatgtagctaattatgataaagacgtagcttcagcagaacttgtactatctaaaaaaagt
ttagataaacaagatacaaccattagtgtatatgcaacaactgaagtattacctgaagat
attacatgggcgaacacagaaggattaggtgtagattcaagaataaataaaggaaatact
gatgttttagactggctaaaatccatccaggcagaaaaagttggagaaatggaatttgca
ttagatgaaaatattatggaacataaaatgaatgtttccaaatttgtaaacaaagatttg
gaagaagaaaatattacttttattctgttagatgaagcaggagtaaatacatatttaaaa
ctttattcgatggaagaagaatacgcacctacgttaaacatttgggatacggtaggtgga
agtgacgaagatgaaagtgaagaaggaaatcttggtgtagctgatgaagaagtggatgca
actcaagatacatatattgaattatcatcaaaagttggaaattcagaaacctataatgca
aagaaaacgttagacttaaaaactagtggtgggcaaacaacaattagaatgcctattatt
gaatttgacttaatgaattctgagtctatcaaagcaggaaagctaggactatccttggca
agtttagatcaagatatatcagtagcagtgtatgccaccaatcaatcattaccagcagat
attacttgggaaagtatagaagggttgaataatgattcaagagtaacggaaaacaaagga
aataccgatgttttagattggattacttcagttggaggaacaaaggttggtaatatcgac
tttttagcggcaggagcaacagaatatacattggatgcttcagaagtgctgaacgaagag
tttaatggggatcaagtaaccttcattttaattgatgaagaagcatcaaatggttactta
aaacttaactcgatagagtctggtaatagtgcaaaacttagcatatggaatgctgatcct
tcagaagaaccaggagaaggaacaccagaagcaaaaaactatacgctaacattcaaagta
aaagacgaaaatgatacctacaatgaattccatacagctgactatgaaggtagtgaagag
gcagctttagagcatggagaaggtctagcagccaaatttgctgataaatatggggaatat
acctatgaagcagtagataatggttttgtatttaactttgaaggtttagaaatagaagta
cctgaagtggaagtttatacacttacattcaaagtaaaggatgaggatggagtttataat
gaattccacacgacagactatgaaagtaatgaagaaacagctttagagtacggtgaaagt
ctagcaactgaatttgttgcactctatggagaatatacgtataaagcagtagagaatggt
tttgtattcaattttgaaggattagaaatagaaacccctgaagtggaactctatacgtta
acgttcaaagtaaaagatgagagtgatgtttacaatgaattctatgtagtaaattatgaa
ggtaatgaagaaacagcacttgattatggagaaaaattagcagttaaatttgctgaaatt
tatggggattatatctatgaaacagcagataatggcttcgtattcaatttcgaagcatta
gaaaatcaagtacctgaagtagaatattctacactaacatttagagtaaaagacaaaaat
ggaatttataatgaattttatgtagtagattacgaagctaaggaagagacagctttagca
tatggagaaaaactggccgttttatttgctgaaacaaatggggagtatatgtatgaggaa
gtagagaatgggtatgtgtttaactttgaaggactagaagttgaaaaatacactctaact
tttaaagtaaaagacgaaaatgaagattacaatgaattttacacagcaatttatgaaggt
agtgaggaagcagctttagagtatggagaatcgctagcaattctgtttgcagaagtaaat
ggagattacaattatgaacgagttgagaatggttatatctttaattttgaagggttagaa
atagaaataccagaagtggaaatctatacattaacgttcaaagtaaaaaacaaagatgga
atttataacgaattctatgtgtttgattacgaaggaagtgtagaaaaagctttagagtat
ggagaaacacttgcagatctatttgctgaaacaaatggaaaatatacgtctgaaaaagta
gagaatgggtatgtgtttaactttgaaggacaaagtgcagaaattcctttaataccacta
gagccaagtataccagttgacccagaagatgatgtagacccagatggcgatacagatcca
gaagatgaaacagacgcagatgcagatgacgaatcaaatataggtggcggagcagatata
gatgacgaatcaaatataggtggcggagcagatgcagatgacaaatcaaatacaggtggc
gaagcagatctagatgacgagtcagatacaaacgcaagctctaataagaaaccagaatca
tcagagaagcctggtaaaatagaggacaaagaaaaaccaagcaactctaaagaggagtca
ttacctgaaactggaacaaaaagaaatatctattcattactaggaatgatggtattagtt
attggagcagctatagttgtgtacaataaaaaatcctcaaaagaataa
DBGET
integrated database retrieval system
