Jeotgalibaca sp. MA1X17-3: LZ578_06760
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Entry
LZ578_06760 CDS
T08634
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
jem
Jeotgalibaca sp. MA1X17-3
Pathway
jem03410
Base excision repair
jem03430
Mismatch repair
jem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZ578_06760 (recJ)
03430 Mismatch repair
LZ578_06760 (recJ)
03440 Homologous recombination
LZ578_06760 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jem03400
]
LZ578_06760 (recJ)
DNA repair and recombination proteins [BR:
jem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LZ578_06760 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LZ578_06760 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LZ578_06760 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Glyco_transf_52
Motif
Other DBs
NCBI-ProteinID:
UJF14730
LinkDB
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Position
1345090..1347408
Genome browser
AA seq
772 aa
AA seq
DB search
MLAAKMNWELRKSEFDPVLVKTLSKEMKTSEAFIKLCLVRGLDTSEKINQFISEEQTIYH
DPFLMHDMKKGVDRILQGIENGEEMVVYGDYDADGITSTAILVETIETLGGNVHFYLPNR
FSDGYGPNTKAFRNLIEQGSQLIITCDNGVSGHEAISLAKELGVDVIVTDHHELSENLPD
AYAIIHPRHPEGEYPFGDLSGAGVALKVATALLERIPFELFDIAAIGTVADLVSLSDENR
WIVKKGIQILRKSERIGLQILYENAGIKALEIDEGTIGFVIGPRLNALGRMGDATPGVDL
LISFDEEKLEKLVNFIQETNTKRQSLVDEIYKSAVSKMDEQEFLPNIIVLGDPSWQEGVL
GIVASRMTEQTGRPSIMLHYNSETGIAKGSGRSVDGLDLFKALSSTSDLLVKFGGHQMAA
GMSLNIDHVDKFTERINTYAEPLSSEIKKGKKVLIDEVLHLNEITIKLLEEVDLLKPFGT
DNQKPIFGIENVSLQNMKQIGADNRHLKLQLKSDESKLDVIGFNKGVLSNHLNEQDPVSI
IGELSINTWRDISKPQMQLKDIKSDSNQYFDKRSTNFQASSLEIENSVYLFFQATVFEKY
ANKLPNNAAAVLLEGVDDIPAFPNELTNLVFFDCPIHLDYVRKFLSDHSFDNYYFYCYPM
KQAYLEGMPSKKDFASLFRYIRNHQNMDVRNKLDSLATYLNIHKNILIFMLTVFSEAKFV
TIDSGILNPIKNPVKINLEDTEAFQNRLEKIEAEKMFIYNPFSQLISWVSGK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttgttagctgctaaaatgaattgggaattacgaaaatcagaatttgatccagtccttgta
aagacactttccaaagaaatgaagacaagtgaagcatttataaagttatgcctcgttcga
ggattggatacttcagaaaaaatcaaccagtttatttctgaagagcaaaccatttaccat
gatccttttttgatgcacgacatgaaaaaaggagtagatcgaatactccaaggcattgaa
aatggtgaagaaatggttgtttacggcgattatgatgcagatggaataacaagtacagct
attttagtcgaaacgattgaaacgttaggtggaaatgttcatttttatttgccaaatcga
tttagcgatgggtacggaccaaacacaaaagcttttcgaaatctgattgagcaaggaagt
caattaattattacgtgtgacaatggtgttagtggtcatgaagcgatctcattagcaaaa
gaactaggtgtagacgttatcgttacggatcaccatgaactatctgaaaaccttcctgat
gcttatgccatcattcatcctcgccatccagaaggagagtacccttttggagatttgtct
ggagcgggagtcgcactgaaagttgccaccgctttgttagaaaggattcccttcgaactc
ttcgatattgctgccatcggtacggttgccgacttagtttctttatcagatgaaaaccga
tggattgtaaaaaaaggaattcaaatcttaagaaaatctgagcgaattggcttacaaata
ctatatgaaaatgctggaattaaagctcttgaaattgatgaagggacgattggatttgta
attgggcctcgtttaaatgcattgggtaggatgggcgatgccactccaggggttgatctg
ttgatttcatttgatgaagaaaagctagaaaaactagtgaatttcatccaagaaaccaat
acaaagagacaatctttagtagatgaaatttacaagtctgcggtaagtaaaatggatgaa
caggaattccttccgaatattattgttttaggagatccttcttggcaagaaggggtttta
ggaattgttgctagtcgaatgaccgaacaaacaggaagaccttctatcatgcttcattat
aattcggaaactggaattgcaaaaggatcgggaagaagtgttgatggacttgatttattc
aaagctttatcttctacatctgatttattagtaaagttcggtggacatcaaatggcggct
gggatgagtttgaacatagaccatgttgacaaatttacagagagaataaatacttatgca
gaacctttaagctcagaaattaaaaaaggaaaaaaagttttgattgatgaagtgctccat
ttgaatgaaatcactattaaacttcttgaagaagtggatttactaaaaccttttggaaca
gataatcaaaaaccgattttcggaattgaaaatgtttctcttcagaatatgaaacaaatc
ggtgcggataatcggcatttaaaattgcaactgaaatcagatgaaagcaaactagatgtc
atcggttttaataaaggcgttttatccaatcatctcaatgagcaggacccagtatcaatc
attggcgaattatccataaatacatggcgtgatatttcgaagccacaaatgcagttaaaa
gatattaaaagtgactctaaccagtattttgataagcgtagtacaaattttcaggcttct
tctctggaaattgaaaatagcgtatacttattcttccaagctactgtttttgaaaaatat
gctaataaactacccaacaatgcagctgcagttttattggaaggagtggatgatatccct
gcttttcctaatgaattaacaaatctagttttctttgattgtcctattcatttagactac
gttcgaaaattcctatccgatcattcttttgataactactacttttattgttatccaatg
aagcaagcttatttagagggaatgccaagtaagaaagactttgcaagtttattccgatat
attcgaaatcatcaaaatatggatgtacgaaataagttagattctttagcaacgtattta
aatattcataagaatatattgattttcatgttgaccgtgttttctgaagcaaaatttgtt
acaatagacagtggcatccttaacccgataaaaaaccctgtaaaaataaatttagaggac
acagaggccttccagaatcgtttagaaaaaattgaagcagaaaaaatgtttatttataat
cctttttcacaattgatctcttgggtatctggaaaataa
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