Jeotgalibaca sp. MA1X17-3: LZ578_08075
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Entry
LZ578_08075 CDS
T08634
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
jem
Jeotgalibaca sp. MA1X17-3
Pathway
jem03030
DNA replication
jem03430
Mismatch repair
jem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZ578_08075 (holA)
03430 Mismatch repair
LZ578_08075 (holA)
03440 Homologous recombination
LZ578_08075 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jem03032
]
LZ578_08075 (holA)
03400 DNA repair and recombination proteins [BR:
jem03400
]
LZ578_08075 (holA)
Enzymes [BR:
jem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZ578_08075 (holA)
DNA replication proteins [BR:
jem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZ578_08075 (holA)
DNA repair and recombination proteins [BR:
jem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZ578_08075 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UJF14964
LinkDB
All DBs
Position
complement(1632549..1633574)
Genome browser
AA seq
341 aa
AA seq
DB search
MRNYATEIAKMKKGEFSPVYLFLGKESYFNQEARETLLNFSMEEADKELNVGIYNMEEVP
LGSALEDAESMPFFGERRLVIVENPYFLTGEKNKSNLDHDLEWLEGYLNHPSESTILVFF
APYEKLDNRKKISKTLKKKAMTVDVSALDSNETRKFLNGFIKNQGYQMERNTLQFFFEKI
EDNLSRGMQELEKLFLAALEDKNITRKMVQDLVAHTLEQNIFELVTYVLKKDTERAIDIY
RDLLLQKEEPIKINAILLGQFRLLLQVKVLAKLGYQQPDMAKVLKVHPYRVKLANQQVRN
LSETILQNAYTGLVETERNLKTGAGLREVQFEMFMLKYAEI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattatgcaacagaaatagcaaaaatgaaaaagggtgaattcagccctgtttat
cttttccttggaaaagaaagttactttaaccaagaagcaagagaaacgttactgaacttt
tccatggaagaagcagataaagagttgaatgtaggaatttacaatatggaagaggttcct
ttaggcagtgctttagaagatgcagagtctatgcctttttttggagaacgtagattagta
attgtggagaatccctattttcttactggagaaaaaaataaaagtaatctggatcatgat
ttggaatggttagaagggtacttaaatcatccttctgaatcaactatacttgtttttttt
gctccttatgagaagttagacaaccgaaaaaaaattagtaagacacttaagaagaaagcg
atgacagtagacgtatcggcgttagactcgaatgaaacgcgtaagtttttaaatggcttt
atcaaaaaccaaggataccaaatggaaagaaacaccttgcaattcttttttgagaaaatc
gaagataatctctctagagggatgcaagaattagagaaactgtttttagcagctcttgaa
gataaaaatatcacgagaaaaatggttcaggatttagtagcacacacattagaacaaaat
atttttgagttagtaacctatgtactaaaaaaagatacggaacgtgcgatagatatttat
cgagatttgctccttcaaaaagaagagcctattaaaataaatgcgatattgttaggacaa
ttccgtttgcttttacaagtaaaggtacttgctaaattgggttaccagcaaccagatatg
gcaaaagttctcaaggtccatccttatagagtaaagttagcaaaccaacaagtaaggaat
ttatccgaaaccattcttcaaaatgcttatacaggccttgtcgaaacagaacggaatcta
aaaacaggtgctggtttgagagaagttcaatttgagatgtttatgttaaagtatgcagaa
atctaa
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