Jeotgalibaca sp. MA1X17-3: LZ578_09275
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Entry
LZ578_09275 CDS
T08634
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jem
Jeotgalibaca sp. MA1X17-3
Pathway
jem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZ578_09275 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jem03400
]
LZ578_09275 (mutM)
Enzymes [BR:
jem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LZ578_09275 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LZ578_09275 (mutM)
DNA repair and recombination proteins [BR:
jem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LZ578_09275 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
Zn_ribbon_6
KH_5
Zn_ribbon_TFIIB
HscB_4_cys
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
UJF16700
LinkDB
All DBs
Position
complement(1847423..1848280)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVETVRRGLNTLVAGSTIEHVDVFWSRMITPPFSSQKFAEKLKGEKIHTIERRGK
YLIFLLDHWAMISHLRMEGKYEVTSRKEEYKKHTHVVFHLTDGRDLRYLDVRKFGRFTLV
PIDKQDEYEPIRKLGPEPTPERFCTSDFQQTLSKTRRTIKAAILDQQVVAGVGNIYADES
LFEARINPLKPANTLTKIEVKQLHDAIIDVIGRAVQAGGSTIRTYKNTLGEAGEFQVSLH
VYGKKNEACPRCGTPIEKIKVAQRGTHFCPQCQPYTPIDKEGTPL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggttgaaacggtaagacgagggttgaacacattagtggcaggg
tctactatagaacacgttgatgttttttggagtcgaatgattactccaccattttcatca
caaaaatttgcagagaaattaaagggcgaaaagattcatacgattgaacgaagaggaaaa
tatttaatctttttgttagatcattgggctatgatttctcatctacggatggaagggaaa
tatgaagttacgagtaggaaagaggaatataaaaagcatacgcatgttgtttttcacctt
acagatggaagagatttacgttacttggatgtccgcaagtttggtcgctttacattagtt
ccaattgacaagcaagacgaatacgaacctattagaaaactagggccagaaccaacacca
gaaagattttgtacaagtgattttcaacagaccctgtctaaaactagacgaacgatcaaa
gcggccattttagatcaacaagttgttgcgggagttggtaatatttatgcagatgaatcc
ctttttgaagcacgaattaatccactcaaaccagcaaatacattaacaaaaatagaagtc
aaacagttacatgatgcgatcattgatgtaattggtcgtgccgttcaagcaggtggatct
acgatacgaacgtataaaaatacactaggcgaagcaggcgagtttcaagtatcccttcat
gtatatggaaaaaagaatgaagcatgtcctcgttgtggaacaccaattgaaaaaataaaa
gtagctcaaagaggaacgcatttttgccctcaatgtcaaccatacactcctattgataag
gaggggacccctctttga
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