Jeotgalibaca sp. MA1X17-3: LZ578_09280
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Entry
LZ578_09280 CDS
T08634
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jem
Jeotgalibaca sp. MA1X17-3
Pathway
jem03030
DNA replication
jem03410
Base excision repair
jem03420
Nucleotide excision repair
jem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZ578_09280 (polA)
03410 Base excision repair
LZ578_09280 (polA)
03420 Nucleotide excision repair
LZ578_09280 (polA)
03440 Homologous recombination
LZ578_09280 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jem03032
]
LZ578_09280 (polA)
03400 DNA repair and recombination proteins [BR:
jem03400
]
LZ578_09280 (polA)
Enzymes [BR:
jem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZ578_09280 (polA)
DNA replication proteins [BR:
jem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LZ578_09280 (polA)
DNA repair and recombination proteins [BR:
jem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LZ578_09280 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZ578_09280 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UJF15178
LinkDB
All DBs
Position
complement(1848371..1851019)
Genome browser
AA seq
882 aa
AA seq
DB search
MSENKKLLLLDGSSLAFRSFYGLLDLNRFKNQNGLHTNALFAFNRIMEKLFETEKPTHLL
VAFDAGKTTFRTEFFEDYKGGRQKMPSELAEQWPYFKVLVDAMGGKSYELANYEADDIIG
TYARRAEKEGFEVVIITGDRDLTQLASEKTRVDITVKGVSDLKAYTPESIREEFGIEPLQ
IIDMKGLSGDASDNYPGVRKVGDKTALKLLKEYGSLENIYEHVDGMKKSKMKENLIADKE
NAFLSKKLATIDVDTPVEPTLDSLALEERDTEKLVSFYREMNFRTFLQDLDLSEDDLSEE
FNEITYTKVDTITPEHFSDEMSLYVEMLENNYHYGTIVGISWGDKEHLYVAEPDVVFQSQ
AFKEWAEDQTKKKMVYDAKRTIVMLHYAGIEISGIEFDTLLASYTINTNDSGRDLALVAQ
EHGYFDVSVDEVIYGKGAKKAVPSEQEVLFKHVARKAKAILELNQKLIDELKENNQQDLY
FDMELPLALVLANMEITGIKVEPERLEIMKEEFSERLLEMEKNIHIEAGEEFNVNSPKQL
SVILFEKMGLKPIKKTKTGFSTAVDVLEKLSSEAPIAQMILDYRQLAKLQSTYVEGLLKC
IKPETGKIHTMYVQTLTQTGRLSSTEPNLQNIPIRMEEGRKIRQAFVAQKEGWKIFASDY
SQIELRILAHISEDDHMKEAFIEGQDIHSSTAMRVFGISDPEEVTANVRRQAKAVNFGIV
YGISDYGLSQNLGITRKKAQEFIDRYFEKYPGIKRYMESIVKEAKETGFVETLFHRRRYL
PDINSSNFNLRSFAERTAINSPIQGSAADVIKVAMIRMQEVLKEKNLQANMLLQVHDELI
FECPAEEIPILEKLVPEVMEQAVSLTVPLIVESGYGDSWYEA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaataagaaattattgttattagatggaagtagccttgctttccgttctttt
tatggactactagatttaaaccgctttaaaaatcaaaatggattgcatacaaatgctcta
tttgcctttaaccgaattatggaaaaattatttgaaaccgaaaaacctactcacctttta
gttgcttttgatgcagggaaaactacttttcgtacggagtttttcgaagattataaaggt
ggccgtcaaaaaatgccatctgaacttgcagaacaatggccttattttaaagttcttgtg
gatgcaatgggtggtaaaagctatgagcttgcgaactatgaagcagatgatattattgga
acctatgcgagacgtgcagaaaaagaggggtttgaagttgttattattacgggagatcgt
gatttaacgcaacttgcttctgaaaagactcgggtagatatcaccgtaaaaggcgtatcc
gatttgaaggcttatacaccagaatccattcgtgaagaatttggaattgaacccttgcaa
attattgatatgaaagggctaagtggtgacgcatcggataattatcctggtgttcgtaaa
gttggtgacaaaacagcactgaagcttttaaaagaatatggttcactagaaaatatatat
gaacatgtcgatggtatgaagaaaagtaaaatgaaagaaaatttaattgctgataaagaa
aatgcttttttaagtaaaaaactagcaaccattgatgtggatactcccgttgaaccaacc
ttggattcattagccttggaagaaagagatactgaaaaattagtttctttttatcgtgaa
atgaatttccgtacctttttacaagatttggatcttagtgaggatgatttatcggaagaa
tttaatgaaattacgtacacaaaagtagataccattactccagaacattttagtgatgaa
atgtctctatacgtagaaatgttggaaaacaattaccattatggaaccatcgtggggatt
agttggggagacaaagaacatctttatgtagccgaaccagatgtagttttccaaagtcaa
gcgttcaaagagtgggctgaagatcaaactaagaaaaaaatggtatatgatgcaaaacga
acgattgtaatgttgcattatgccggaatagaaatttcagggattgagtttgatacgtta
cttgcttcttatacgattaatacgaatgacagtggtcgtgacttggctttagtggcacaa
gaacatggatattttgatgtatctgttgatgaagtcatttatggaaaaggagcaaagaaa
gctgttccttctgaacaagaagttttgtttaagcacgtagctcgtaaagcaaaagcaatt
ctagaactaaatcaaaaactaattgatgaattaaaagaaaataatcaacaagatttatac
tttgacatggaacttcctttggccctagtgctagcaaacatggagattacgggaatcaaa
gtagagccagaacgtttagaaattatgaaagaagaattctcagaacgactgttagaaatg
gaaaaaaacatccatatcgaagcaggagaagagttcaatgtaaattcacctaaacaacta
agtgtcattttatttgaaaaaatgggactaaagccgattaaaaaaacaaagaccggcttt
tcaacagccgttgacgttctagaaaaacttagcagtgaagcacctattgctcaaatgatt
ttagattatcgtcagttagcaaaacttcaatcaacgtatgtagaaggtttattgaagtgc
atcaaaccagaaacgggtaaaattcatacgatgtatgttcaaacgctaacccaaacagga
cgactaagttcaacagaaccgaatctacaaaacattccgattcgaatggaagaaggaaga
aagattcgtcaagcttttgttgctcaaaaagagggctggaaaatatttgcttctgactat
tctcagattgaattaagaattttagcgcatatttcagaagatgaccacatgaaagaagct
tttattgaaggacaagacattcatagttctaccgctatgagagtttttggaattagtgat
ccagaagaagttaccgcaaatgtgcgtcgtcaggcaaaagcagtaaactttggaattgtt
tatggaattagtgactatggactttctcaaaacttaggaattacacgtaaaaaagctcag
gaatttatcgatcgttattttgaaaaatacccaggaattaaaaggtatatggaatctatc
gttaaggaagcaaaggaaactggatttgttgaaacgttattccatcgtcggcgatattta
ccagatattaatagtagtaattttaatttgcgttcctttgcagaacgtactgctatcaat
tcacctatacaaggttccgcagcggatgtcattaaagtagcaatgattcgtatgcaagaa
gttttaaaagaaaaaaatctacaagcaaatatgcttttacaagtacacgatgaactaata
ttcgaatgtcccgcagaagaaatccctattttggaaaaattagttcctgaagtaatggaa
caagctgtttccttaacagtacctttgattgtagaaagtggatacggagatagttggtac
gaagcataa
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