Jeotgalibacillus malaysiensis: JMA_08190
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Entry
JMA_08190 CDS
T03570
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JMA_08190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jeo03019
]
JMA_08190
03009 Ribosome biogenesis [BR:
jeo03009
]
JMA_08190
Enzymes [BR:
jeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JMA_08190
Messenger RNA biogenesis [BR:
jeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JMA_08190
Ribosome biogenesis [BR:
jeo03009
]
Prokaryotic type
rRNA helicases
JMA_08190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF4422
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AJD90136
UniProt:
A0A0B5AJ93
LinkDB
All DBs
Position
720929..722392
Genome browser
AA seq
487 aa
AA seq
DB search
MTLFSELPISPVIQKSIKRMGFEEATPIQAGTIPLSAEGKDIIGQAQTGTGKTAAFGIPM
LEKVDTKSSAIQGLIIAPTRELAIQVSEELYKIGSDKRVRVLSVYGGQDIQRQIRAMKKR
PHIIVGTPGRLLDHINRRTLKLDEVETLVLDEADEMLNMGFIDDIESILKNVPETRQTLL
FSATMPGPIRKIAERFMRDPEVVKVKAKEMTVENIEQFFVKAHEREKFDVLSRLINVQSP
ELAIVFGRTKRRVDELARALEIRGYMAEGIHGDLTQAKRMSVLKKFKEGRIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKKGMAMTFVTPREMNYLRVVEQTTK
KKMEQMRPPSSSEALEGLQRAAIDELKETVKKNNLEEYKVIARELLNDGDESLDLIAAAL
KILTKEPDETPVDITPERPLASKKKKPYRKDDKKYGNRGGNRSGGKSGGGKPYNSRQRQP
KRQSREG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgacacttttttcagaactaccaattagtccagtaatccagaaatcaattaaacgcatg
ggatttgaagaggcaacgccaattcaggctggcacaattccactatcagcagaaggtaaa
gacattatcgggcaggcgcagacaggaacaggtaaaacggctgcattcggtattccaatg
cttgagaaagtggacacaaaatcatcagcgattcaaggcctgatcatcgcaccaacgcgt
gagcttgcgattcaggtatctgaagagctttacaaaatcggaagcgacaagcgtgtacgc
gtactgtcagtatacggtggccaggacattcagcgccagatccgcgcaatgaaaaaacgc
ccgcatatcatcgttggtacaccgggacgtctgcttgaccacattaaccgccgcacgctg
aagcttgatgaagtggaaacacttgtacttgacgaagcagatgaaatgctgaacatgggc
ttcatagatgatatcgaatcaatccttaaaaacgttccggaaacgcgccagacgctattg
ttctcagcaacaatgcctggaccaatccgtaaaattgctgaacgcttcatgagagatcct
gaagttgtaaaagtaaaagcgaaggaaatgacagttgaaaacatcgagcagttcttcgta
aaagcacacgagcgtgagaagttcgacgtactttcacgtctgatcaacgttcagtcacct
gagcttgcaatcgtattcggacgtacaaagcgtcgcgttgacgagcttgcacgtgcactt
gaaatccgcggctacatggctgaaggaattcacggtgacctgactcaggcgaagcgtatg
agtgtactgaagaagttcaaagaaggccgtattgacgtactcgttgcgacagacgttgct
gcacgtggacttgatatttcaggcgtaacacacgtatacaactatgacattcctcaggat
cctgaaagctacgttcaccgtattggacgtacaggccgtgcaggtaaaaaaggtatggcg
atgacattcgttacaccacgtgaaatgaactaccttcgtgttgttgaacaaacaacgaag
aagaagatggagcaaatgcgtccaccaagttcatctgaagcacttgaaggtcttcagcgc
gcagctattgatgagctgaaggaaacagttaagaagaataaccttgaagaatacaaagtc
attgcacgtgagctactaaatgacggtgacgagtcactggatctaatcgcagcagctctt
aagatccttacaaaagagccggacgaaacaccagtagatatcacaccggaaagaccactt
gcatctaaaaagaaaaagccataccgcaaagacgacaaaaagtatggtaaccgcggtgga
aaccgtagcggcggcaaaagcggaggcggtaagccttacaacagccgtcagcgccagcca
aagcgccaatcacgcgaaggctag
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