Jeotgalibacillus malaysiensis: JMA_08370
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Entry
JMA_08370 CDS
T03570
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
jeo
Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jeo03021
]
JMA_08370
Transcription machinery [BR:
jeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JMA_08370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HNF-1_N
DUF134
HTH_3
DUF1492
IF2_N
HTH_37
PhyR_sigma-like
HTH_28
HTH_Crp_2
Phage_TAC_12
SieB
Motif
Other DBs
NCBI-ProteinID:
AJD90154
UniProt:
A0A0B5APY3
LinkDB
All DBs
Position
733461..734255
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AA seq
264 aa
AA seq
DB search
MRKLSQPNQPSKDEVLEWIKAYQENQDDDAQHKLVVHYKNLVESIARKYSKGKSYHEDIA
QVGMIGLLGAIRRYDDTFGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKA
TVEELTTDLQRSPKVSEIAMHLEVSEEEILEAMEMGKSYQALSVDHSIEADSDGSTVTLL
DIVGSMDDNYEKTDQRMVLEKVLHVLSDREKQIIQYTYLENMSQKDAGDMLGISQMHVSR
LQRRAIKKLRDAIQEENAQDGDFT
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaactgtctcaacctaaccagccaagtaaagacgaagtacttgaatggatcaaa
gcctaccaggaaaaccaggatgatgacgcgcagcacaagctggtcgttcactataaaaat
cttgttgagtccattgcaagaaagtactcgaaaggaaagtcatatcacgaagatattgca
caggtcggcatgattggtctgcttggtgcgatcagacgatatgatgacacattcggtaaa
agcttcgaagcctttgccattccaaccattatcggtgagatcaagcgattcttacgcgat
aaaacgtggagtgtccacgtgccaagacggatcaaagaacttggaccgaaaattaaagca
acagttgaagagctgacgactgatttgcagcgctctccaaaggtaagtgaaatcgccatg
caccttgaagtgtctgaagaagaaattctagaagcgatggaaatggggaaaagctatcag
gcgctgtcagttgaccattcaattgaagctgactctgacggcagtacagttacactgctt
gatatcgtcggcagcatggatgataactatgaaaaaaccgatcagcgcatggtccttgaa
aaggtccttcacgtgctgagcgatagagaaaaacagattatacaatatacgtatcttgaa
aatatgagtcaaaaagacgcgggtgatatgctcggtatatctcaaatgcatgtgtccaga
ctgcagagaagagcaatcaagaaactgcgtgatgccattcaggaagaaaatgcacaagat
ggtgactttacttga
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