Jeotgalibacillus malaysiensis: JMA_11340
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Entry
JMA_11340 CDS
T03570
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03420
Nucleotide excision repair
jeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMA_11340
03430 Mismatch repair
JMA_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_11340
Enzymes [BR:
jeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMA_11340
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMA_11340
MMR (mismatch excision repair)
Other MMR factors
JMA_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJD90451
UniProt:
A0A0B5AKA9
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All DBs
Position
1017588..1019807
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AA seq
739 aa
AA seq
DB search
MQFLTDRLLNGMNPEQAKAIKATDGPLLIMAGAGSGKTRVLTHRIAYLMIEKGVAPYNIL
AITFTNKAAREMKDRVGSILGGAAEDVWISTFHSMCVRILRRDIDRIGFNRNFTILDSTD
QQSVIKRILKDKNLDPKKFDPRGILAAISSAKNELTTPEQFAKDAGSYYDQTISEVFTEY
QKRLRKNSALDFDDLIMQTIHLFERVPEVLENYQRKFQYIHVDEYQDTNRAQYMLVKQLA
SRFKNLCVVGDSDQSIYRWRGADITNILSFEKDYPNANVILLEQNYRSTEKILDAANAVI
KNNPNRKAKNLWTDNKGGQKITYVRADSEQGEGQFVAGKINELVRSGVRKPSDFAILYRT
NAQSRVMEEVLMKSNIEYTIVGGTKFYDRKEIKDILAYLRLVANPDDDISLIRIINVPKR
GVGTTSLDKIANYARDNEMSMYNALELADFIGLSGKAAKTVLEFREFIKNFTQMQEYLSV
TELVEDILEKSGYREALQAEKTIEAQSRLENIDEFLSVTKEFEKASDDKSLIAFLTDLAL
VADIDQLDKDDAPADAVTLMTLHSAKGLEFPVVFLMGLEEGVFPHSRSLMEEAEMEEERR
LAYVGITRAEEELYITNAQMRTLFGRTNMNPVSRFIAEIPAELLEEPMKKETSSGSRSFG
SPSKAQPRKAPVRRPAPRNTGGSDHGWSVGDKAQHGKWGTGTVVSVKGEGDSMELDIAFP
SPTGVKRLLAKFAPVNKVT
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagatcgtctgctaaacgggatgaaccctgagcaggcaaaagcaatt
aaagcaactgatggcccgctgctgattatggcaggtgcgggttcagggaagactagagta
ctgacacaccggatcgcgtatttaatgattgaaaaaggtgtagcgccttacaacattctg
gcgattacctttacgaacaaagctgcgcgtgaaatgaaagaccgtgtaggaagcattctt
ggcggagcggctgaagatgtgtggatttcaacatttcactccatgtgtgtgaggatttta
agaagagacattgacagaattggcttcaaccgtaattttacgattcttgattctacggat
cagcagtcagtgattaaacgtattttaaaagataaaaacctggatcctaaaaagttcgat
ccgcgcggtattcttgctgcgatcagctcagcaaaaaatgagctgacaacgcctgaacag
tttgcaaaagacgcaggcagttattacgatcagacgatcagtgaagtttttacagaatat
cagaaaaggctgcgtaagaactcagcgcttgatttcgatgatttgatcatgcagacgatt
catctatttgaacgtgtgcctgaagtgcttgaaaattatcagcgtaaattccagtacatc
cacgtggatgagtatcaggatacaaacagagcgcagtatatgcttgtgaagcagctcgct
tcccgctttaaaaacctttgcgtagtcggtgattctgatcagtcgatttaccgctggaga
ggcgcggatattacaaatatcctgtcgtttgaaaaagactatccgaatgcgaacgtgatc
ctgcttgagcagaactaccgttcaactgaaaagatcctggatgccgcgaatgcggtcatt
aaaaacaacccgaaccgtaaagcgaagaatctctggactgataataaaggtggtcagaag
atcacatatgtgcgggcagacagtgagcagggagaaggacaattcgttgcaggtaaaatc
aatgagctcgtccgctcaggtgtaagaaagccatctgactttgcaattctgtacagaacc
aacgcgcaatcccgtgtcatggaggaagtactcatgaagtctaatattgagtacacgatt
gtcggcgggacgaagttctatgacagaaaagaaattaaagacattctggcttaccttaga
cttgtcgccaatccggatgatgatatcagtctgatcagaattattaacgtaccaaaacgc
ggtgtcggtacaacgtcgcttgataaaattgcaaactacgcacgtgataatgaaatgtcg
atgtataacgcactggagcttgcagattttattggtttaagcggtaaagcggcgaaaaca
gtacttgagttccgtgagtttattaaaaactttacacaaatgcaggaatatttatcagtg
actgagcttgtcgaggatattcttgaaaagtcgggctaccgcgaagcgcttcaggctgaa
aaaacaatcgaagcacagagcaggcttgaaaacattgatgaattcctttcagtcactaaa
gaatttgaaaaggcaagcgacgacaagagtctgatcgcattcctgacagaccttgcactc
gttgcagatattgaccagcttgataaggatgatgccccggcagatgcagtcacattaatg
actttgcactctgcaaaaggccttgagttccctgttgtatttctgatggggcttgaagaa
ggcgtattcccgcacagccgctcactaatggaagaggctgagatggaagaggaaaggcgc
cttgcttacgtaggtattacacgtgcagaagaagaattgtatattacaaatgctcagatg
agaacgctattcggacgtacaaacatgaacccggtctcaaggtttatcgctgaaattccg
gctgaactgcttgaagaaccaatgaaaaaagaaacttcttcaggaagcagaagctttggg
tccccgtctaaagcacaaccgcgcaaggcgcctgtcagacgacctgctccgcgtaataca
ggtggcagcgatcatggctggagcgtaggagataaagcacagcacgggaaatggggcacc
ggtaccgttgtaagcgtcaaaggggaaggcgattcaatggaacttgatattgcatttcca
agcccgaccggcgtgaaacgtctgctggcgaaatttgcacctgttaataaagtgacataa
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