Jeotgalibacillus malaysiensis: JMA_13340
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Entry
JMA_13340 CDS
T03570
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
jeo
Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jeo03019
]
JMA_13340
Messenger RNA biogenesis [BR:
jeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JMA_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
GldM_1st
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AJD90651
UniProt:
A0A0B5AKR9
LinkDB
All DBs
Position
1221053..1222000
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AA seq
315 aa
AA seq
DB search
MKGITFLNPGDPVDQYLLIKQMTKGVTTAGKPFLTLIFQDRSGDIEAKLWDAGEEEERKY
QPQTIVKVAGEIHNYRGKNQLRLRQIRPASAQDNVKMGDFLETAPLSVESMTEELTQYIF
EMKNPVIQRITRHLLKKYQKSFMEYPAATKNHHEFVSGLAFHVISMLRLGKFLAEQYPSL
NKDLLYAGIILHDMGKVKELSGAVSATYTLEGNLLGHISIMVNEIAEAAKELEIEAEEVL
LLQHMILSHHGKAEWGSPKPPMLMEAEILHYIDNIDAKMVMMDRVISRTTSGEYTERVFA
LENRSFYRPHMYDQE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcataacttttttaaatccgggagatccggtcgaccagtatctattgattaaa
caaatgacaaaaggtgtaaccactgcaggaaaacctttcttaacacttatttttcaagac
agaagcggtgatattgaagcaaagttatgggatgcaggtgaggaggaagaacgtaaatat
cagcctcagaccatcgtaaaagttgccggtgaaattcataactaccgcggcaaaaatcag
ctgagattaagacagatcagacctgcttcagctcaggacaatgtgaagatgggtgatttc
cttgaaacggcaccactatcagttgagtcaatgactgaagaactgacgcaatacattttt
gaaatgaaaaaccctgtgattcagagaattacacgccaccttctgaaaaaatatcagaaa
tcatttatggagtacccggcagcaacgaaaaatcaccatgaatttgtatcagggctcgca
tttcacgtgatatctatgctaagactaggaaaattcctggctgagcagtacccatcttta
aataaagaccttctgtacgccggtattattctgcatgatatgggtaaagtgaaggaactt
tcaggagctgtatcagcaacctatacacttgaaggaaatctgcttggtcatatttcgatt
atggtcaatgaaattgctgaagcagcaaaagaacttgaaatagaggcagaagaggtgctg
ttattacagcatatgattttatcacatcatggtaaagcagaatggggttcgccaaagccg
ccgatgctgatggaggcagagatccttcattacattgataacatcgatgcgaagatggtc
atgatggacagagtaatcagcagaacgacttcaggagaatatactgaaagagtatttgcg
cttgaaaacaggtcattttaccgtccgcatatgtacgatcaggaatag
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