Jeotgalibacillus malaysiensis: JMA_16690
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Entry
JMA_16690 CDS
T03570
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jeo
Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_16690
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_16690
Enzymes [BR:
jeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JMA_16690
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Topoisomerases
JMA_16690
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JMA_16690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Auto_anti-p27
Zn_ribbon_RPB9
DUF2996
Motif
Other DBs
NCBI-ProteinID:
AJD90986
UniProt:
A0A0B5ALI7
LinkDB
All DBs
Position
1556142..1558220
Genome browser
AA seq
692 aa
AA seq
DB search
MADFLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVEKEFEPKYITIRGK
GPVLKELKTAAKKAKRVFLAADPDREGEAIAWHLAHSLDLDLDSECRVVFNEITKDAIKE
SFKHPRKIDMDRVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFQPEEYWTIDGQFKKGSKDFQASFYGLNGKKKKLENEEDVKEVLNQMKDKKFEVQN
VTKKERKRNPAPSFITSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGKKEGTVGLITYM
RTDSTRVSDVAKAEAANIIEEQYGKEFLTSEKPKSAKKSNAQDAHEAIRPTSALRTPLSV
KQYLSRDQYRLYKLIWERFVASRMAPAVMDTMSVDLMNGDVQFRASGSKVKFAGFMKVYI
EGSDDKSDDNENYLPDLKEGETVSSEDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVSLDNKRFVPTELGEIVLELIVEFFPEIIDVEFTAKMEKELDDVEEG
QIQWVKIIDEFYKDFEGHLEKAEQEMEKVEIKDEYAGEDCEECGNAMVIKMGRYGRFMAC
SNFPDCRNTKPIVKEIGVKCPTCKEGNVIERKSKKNRIFYGCDRYPECEYLSWDKPVDRQ
CPKCDTTLIEKKLKKGNQIQCPNCDYKEEHQV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttttagtaattgttgaatcacccgccaaagcaaagacaattgagcggtat
ttaggaaaaaagtataaagtaaaagcatctatgggacatgtaagagacctcccgaaaagc
cagatgggtgtagatgttgaaaaagaattcgagccgaagtacattacaatcagaggtaaa
ggccctgtattgaaagaactgaaaacagcagctaaaaaagcgaaacgtgtctttctggcg
gctgaccccgacagagaaggggaagcgattgcctggcatttggcacatagtctcgacctt
gatctggattcggaatgccgggttgtatttaatgaaatcacgaaggatgcgattaaggag
tcctttaagcatccccgtaaaattgatatggaccgtgtagatgcacagcaggcaagacgg
atattagatagacttgttggttataatatcagcccgattctatggaaaaaagttaagaaa
ggtctgagtgccggcagagttcaatcagttgctgtccgccttatcatcgaccgcgaaaat
gaaattaaaaactttcaacctgaagaatactggacaattgatggacagttcaaaaaaggc
agcaaagatttccaggcatctttttacggattaaatggtaaaaagaaaaagcttgaaaat
gaagaagatgtaaaagaagttttaaatcagatgaaggacaaaaagtttgaagttcaaaat
gtaactaaaaaagaacgcaaacgaaatcctgcgccatcatttattacatcatcccttcag
caggaagccgcaagaaaattaaatttcagagcaagaaaaacaatgatgcttgcacaacag
ctatatgaaggaatcgaccttggtaaaaaagaaggcacggttggtctgattacgtacatg
cgaacagattcaacacgtgtatctgatgtagcaaaagctgaagcggctaatattattgaa
gagcaatacggcaaagagtttctcacatcggagaagccaaaatctgcaaagaaaagtaat
gcacaggacgcccacgaagcaatccgtccgacaagcgccctgcgtacaccgctttctgtg
aagcaatatctgagcagagatcagtacagactatataaattaatctgggagcgctttgtt
gcaagccgtatggcacctgcagtgatggatacaatgagtgttgatctgatgaatggtgat
gttcagttcagagccagcggatcaaaagtaaagtttgcaggttttatgaaagtctatatt
gaaggcagcgatgacaaatcagatgataatgaaaactatctgcctgatttaaaagaaggg
gagacagtatcttcagaagatattgaaccgaaacagcactttactcagccgcctccaaga
tacaccgaggcaagactggtaaaaacgcttgaggagctggggataggaagaccttctacc
tatgcgccgacacttgatacaattcaaaagcggggctatgtatcccttgataacaagcga
ttcgttccgactgagctcggtgaaatcgtacttgaactgatcgtcgagtttttccctgaa
attattgatgtagaatttacagcaaaaatggagaaagaacttgatgatgtagaagaaggt
cagatacaatgggtaaagatcattgatgagttttataaagactttgaaggacatcttgaa
aaggccgaacaggaaatggaaaaggtcgagatcaaagatgagtacgccggtgaagactgc
gaagagtgcggaaatgcaatggtcattaaaatgggccgatatgggcgttttatggcctgc
agcaatttccctgattgcagaaacactaagccgatcgtaaaagaaatcggtgtaaagtgc
ccaacctgtaaggaagggaacgtcattgagcgtaaaagtaagaaaaaccgtatattctac
ggatgcgaccgctatccggagtgtgagtatctctcatgggataagccggttgacagacaa
tgtccaaagtgtgacacgacattaattgagaagaaacttaaaaagggcaatcagattcaa
tgtccgaattgtgactataaagaagaacatcaggtataa
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