Jeotgalibacillus malaysiensis: JMA_21620
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Entry
JMA_21620 CDS
T03570
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jeo03019
]
JMA_21620
03009 Ribosome biogenesis [BR:
jeo03009
]
JMA_21620
Enzymes [BR:
jeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JMA_21620
Messenger RNA biogenesis [BR:
jeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JMA_21620
Ribosome biogenesis [BR:
jeo03009
]
Prokaryotic type
rRNA helicases
JMA_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJD91479
UniProt:
A0A0B5ATZ0
LinkDB
All DBs
Position
complement(2000893..2002194)
Genome browser
AA seq
433 aa
AA seq
DB search
MSSFKQYNFQPFLIDAIEKLGFHAPTAIQEKMIPMINRGESAIGQSQTGTGKTHSYLLPL
INQINPDRQEVQVVITAPTRELAKQIHHEVKFLIENTALTAKVFVGGTDKQRAIEKLKQQ
PHIVVGTPGRINDLVSEQALQVYTAKAIVIDEADLMLEMGFIEDVDQVAARMKEDLQIYV
FSATIPEKLKPFLKKYMENPQYAHIEPKQVQAENIEFILVPQKSRSREAVLLDTLNAINP
YLAIVFTNTKSKADEVADYLLNKGLKTGRVHGGLSPRERNKMMKQIRDLEYQYIVATDLA
ARGIDIPGVSHVINFELPQDLDFFIHRVGRTARAGHSGTAITIYEASDEDALAQIEKKGI
TFSHQEVKGGEWVTLNDRHKRSSRPKGENEIDKKAKSLVRKPKKVKPGYKKKMNYKMEQI
KKKERRKNRRNNK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatttaaacaatataattttcagccatttttgatagatgcaattgaaaagctt
ggattccatgcaccaacagcgattcaggaaaagatgattccgatgatcaaccgcggtgaa
agtgcaattggtcaatctcagactggaacaggaaagacccattcttacctgcttccactg
attaatcagatcaatcctgaccgtcaggaggtgcaggtagtaatcacagcaccgacaaga
gaacttgcaaaacagattcatcatgaagtaaagtttctgattgaaaatactgcactgaca
gcaaaagtatttgtaggcggaacggacaagcaaagagcgattgaaaagctgaagcagcag
ccgcatatcgtggtaggtacccctggcagaatcaatgatttggtctctgaacaggcgctt
caggtctatacagcaaaagcgatcgttattgatgaagctgacctgatgcttgaaatgggc
tttattgaagacgttgatcaggttgcagcccgcatgaaagaagaccttcaaatttatgtt
ttctcagcaacaattcctgaaaaacttaagcctttcctgaaaaaatacatggaaaaccct
caatatgcccatatcgaaccaaaacaggttcaggcagaaaatattgaatttatacttgtt
cctcaaaaaagccggtctcgtgaagctgtactgcttgatacgttaaacgccattaatcct
taccttgcgattgtctttacaaatacaaaatccaaggctgatgaagtcgctgattatctt
ttgaataaaggtcttaaaacaggtcgggttcatggtggactctcgccacgtgagcgtaat
aaaatgatgaaacagatcagagacctcgaatatcagtacattgttgcgactgatcttgca
gcaagaggaattgatattccaggtgtcagtcacgttattaactttgaacttccgcaggac
ctggatttctttattcaccgtgtaggcagaactgcacgcgcaggacactctggaactgcg
atcacgatctatgaagcttccgacgaggacgcacttgcccagatcgagaaaaaaggtatc
acgttcagtcaccaggaagtaaaaggcggcgaatgggtaacattgaacgatcgtcataag
cgttcaagtcggccaaaaggtgaaaatgaaattgataaaaaagctaaatctcttgtacgt
aaaccgaaaaaagttaagccaggctataaaaagaaaatgaattataagatggagcagatt
aaaaagaaagaacgcagaaagaacagaagaaataataaataa
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