Jeotgalibacillus malaysiensis: JMA_24150
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Entry
JMA_24150 CDS
T03570
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMA_24150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_24150
Enzymes [BR:
jeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JMA_24150
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JMA_24150
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JMA_24150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DNA_ligase_ZBD
Zn_ribbon_6
Zn_ribbon_TFIIB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AJD91732
UniProt:
A0A0B5AST6
LinkDB
All DBs
Position
complement(2220666..2221538)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGLSPKVEGLIIEQVTFSDTIIKAHKAGRKAVVKGGGLDVFKFAVTQKE
ISAIDRRSKYLLFRLGQSEDEMLILSHLGMTGAWFVVNELGEILEDRFRNHVHVIFHLSN
GQKLVYSDIRRFGEMRFLPSEEAHPPLAEIGPEPFDEDAEFRFLATLMLPKFSRKPIKES
IMHHSVIAGCGNIYATEALFRAGVSPKRRTDRLSLKKKRELFHHIVDVLKEGIAAGGSSI
SDYRNVNGEAGGMQERLQMYAKSTCPVCGSAVKKAVVGGRTSHYCTTCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagtagagcacgtgaaaaggggtctctctccaaaggttgaagga
ctgatcatagagcaggtaaccttttctgatacaatcatcaaggcccataaagccggtaga
aaagcggttgtaaaaggaggagggctggatgtctttaagtttgcagttactcaaaaagaa
atctcagcaatagatcgcagaagcaagtatcttttgttccgcctcggtcaatcagaagat
gagatgctaattctgtcacaccttggtatgacaggtgcgtggtttgtagtcaatgaactc
ggagaaatacttgaagacagattccgtaaccatgtccacgtcatttttcatttatcaaat
gggcagaagcttgtgtattccgatattcgcagattcggtgaaatgaggtttcttccctct
gaagaagcacatccgcctttagctgagatcggcccggagccttttgatgaagatgcagag
ttcagatttctagctactttaatgcttcctaagttctcgaggaagccgattaaagaatcc
attatgcatcatagtgtcatcgcgggctgcggcaatatctatgcaacagaggcactgttc
agagccggcgtcagccctaaaagaagaactgacaggcttagcctgaaaaagaaaagagag
ctatttcaccatattgtagacgttttgaaagaagggattgcagccgggggaagcagcatc
tctgattatagaaacgtaaacggagaggctggcggtatgcaggagcgcctgcaaatgtat
gcgaaatctacctgcccagtctgtggttcagcggttaaaaaagcagttgtcggaggccgg
acttcacattactgcacaacatgtcaaaagtaa
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