KEGG   Jeotgalibacillus malaysiensis: JMA_24160
Entry
JMA_24160         CDS       T03570                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
jeo  Jeotgalibacillus malaysiensis
Pathway
jeo03030  DNA replication
jeo03410  Base excision repair
jeo03420  Nucleotide excision repair
jeo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JMA_24160
   03410 Base excision repair
    JMA_24160
   03420 Nucleotide excision repair
    JMA_24160
   03440 Homologous recombination
    JMA_24160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jeo03032]
    JMA_24160
   03400 DNA repair and recombination proteins [BR:jeo03400]
    JMA_24160
Enzymes [BR:jeo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JMA_24160
DNA replication proteins [BR:jeo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     JMA_24160
DNA repair and recombination proteins [BR:jeo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     JMA_24160
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JMA_24160
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 HHH XPG_I PIN_12
Other DBs
NCBI-ProteinID: AJD91733
UniProt: A0A0B5AT20
LinkDB
Position
complement(2221556..2224180)
AA seq 874 aa
MPKKLMLIDGNSIAYRAFFALPLLNNDKGIHTNAIYGFTTMLMKLLDEEKPTHLMVAFDA
GKTTFRHKTFEDYKGGRQKTPPELSEQFPFIRDLLNAHNIKYYELDQYEADDIIGTLSTQ
AEKDGFETVVISGDKDLTQLASEKIRVDITKKGITDLEKYTPAHIEEKYGLTPDQIIDMK
GLMGDSSDNIPGVPGVGEKTAIKLLKEFGTLENVLDSIDQVSGKKLKERLEENKQLAEMS
KKLATITRTAPVTVKLDELEKQEADYDKLTKLYKELGFNSLLDKLDGEEEEIELKDIEWE
EVTDFTPEQLPSDAGLYVELYDVNYHTADILGIAVHADQKTYFITPDNAAKSETFKQWIE
DETNSKSVYDAKASIVAFARLGMELKGIDFDLLIASYVIDASEAADDFASIAKRHGADAV
PTDESVYGKGAKKKVPEHYDLAQHTARKAATIHAIKETCIASLEKNEQLELFEKLELPLA
TVLAEMERMGVQVDIDRLKDMGIELKKRLEEIQSDIYRIAGEEFNINSPKQLGVILFETL
QLPVLKKTKTGYSTSADILEKLKPEHEIIDHILHFRQLGKLQSTYIEGLLKVIHDDSNKI
HTRYNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWVMFAADYSQIELRVL
AHISEDEGLKEAFHKGMDVHTKTAMDVFGVEKEDVTSGMRRHAKAVNFGIVYGISDYGLS
QSLDITRKEAAEFIKKYLDSYPKVKEYMDDIIHEAKQKGYVETLLHRRRYIPEITSRNFN
LRGFAERTAMNTPIQGTAADIIKKAMIEMAERLKAEKLQTRMLLQVHDELIFECPKDEIE
KLEKIVPEVMESAVALSVPLKVDYSYGDTWYDAK
NT seq 2625 nt   +upstreamnt  +downstreamnt
ttgccgaaaaaattaatgctgatcgatgggaacagtatagcctaccgtgctttttttgca
ctgccattactgaacaacgataaaggcattcatacaaatgcgatttacggatttaccact
atgctgatgaagctgcttgatgaggagaaaccgacacatctgatggttgcttttgacgcg
gggaaaacaactttccgtcataaaacatttgaagattataaaggtggcagacaaaaaacg
ccgcctgagctttcagagcagtttccgtttattcgggatttactgaatgcacataacata
aaatactatgagcttgatcagtatgaagcggacgatattatcggcacattaagcacacag
gctgaaaaagacggctttgagacagtcgttatttctggtgataaagatttaactcagctc
gcttcagaaaaaatccgggtggatatcactaaaaaaggtattactgatcttgagaaatac
acgcctgctcatattgaagaaaagtatggtctcacacctgatcagattattgatatgaag
gggttaatgggagattcttcagataacatacctggggttccgggcgttggggagaaaacg
gcgattaagctgctgaaggagttcggtacacttgaaaatgttctggattccatcgatcaa
gtgagcggtaaaaaactgaaagaaagacttgaagaaaataagcagctggctgagatgagt
aagaagcttgcgacgatcacaagaacggctcctgtgactgttaaactggacgagcttgaa
aaacaggaagctgattatgataaattgactaagctttacaaagaactcggattcaactca
ctgctcgataagctggacggtgaagaggaagagatcgagctgaaagatatcgaatgggaa
gaagtgacagactttacaccggagcagcttccatcagatgctggactctatgtagaacta
tatgatgtgaattatcatacagctgatattctaggtattgctgtccacgctgatcagaaa
acgtattttataacacctgacaatgctgcaaagtctgagacatttaaacagtggatagaa
gatgaaacgaactcgaaatctgtctatgacgcgaaggcgtcaattgttgcatttgcccgt
cttggtatggagttaaaagggatagatttcgacctgctgattgcttcttacgtgatcgat
gcttctgaagcagcggatgattttgcttcaattgcgaaaagacatggggccgacgcggta
ccgacagatgagtctgtgtatggaaaaggcgctaagaaaaaggttcctgaacattacgat
ctcgcgcagcatacagccagaaaagcagcaacaattcatgcgattaaagaaacctgtatt
gcttcccttgaaaagaatgaacaacttgagctttttgaaaagcttgaactgccgcttgcc
accgtccttgctgaaatggaacgaatgggcgtgcaggtggatattgaccgtttgaaggat
atggggatcgaactgaagaaaaggcttgaagaaattcagtctgatatttacagaattgcc
ggtgaagaatttaatattaattcgcctaagcagctcggtgtgattttatttgaaaccctg
cagctgcctgtgttgaaaaaaacaaaaacaggctattcaacttcagcagacattttagaa
aaattaaagcctgagcatgaaattattgatcatattttacatttcagacagcttggtaaa
ctgcagtccacctatattgaaggactgctgaaagtgatccatgacgactcgaataaaatt
catacaagatataatcaggtactcacccagactgggcgcttaagctcaactgaccctaat
ctccaaaacattccgatcagactagaagaaggccgtaaaatccgtcaggcattcataccg
tctgaaaaagactgggtaatgtttgcagcggactactcacagatcgagctgagagtcctc
gcacacatttctgaggatgaagggttaaaagaagccttccacaaaggaatggatgtgcat
acgaaaactgcaatggatgttttcggagttgaaaaagaagatgtcacttcgggtatgaga
aggcatgcgaaagcagttaactttggtatcgtttatggtatcagtgattacggtttgtct
cagagtcttgacattacaaggaaagaagcagcagagtttattaaaaaatatctcgacagc
tatcctaaggtaaaagaatatatggatgatatcattcatgaggcaaagcagaaaggctat
gtggaaacattgctgcaccgccgcagatatattcctgagatcacaagcagaaactttaat
ctgagagggtttgctgaacgtacagctatgaataccccgattcagggaacagctgctgat
attattaagaaggcgatgattgaaatggcggaacgtctgaaggctgaaaaactgcaaacg
cgtatgctgcttcaggtgcacgatgaactgattttcgagtgcccgaaagatgaaattgaa
aagcttgaaaagatcgtaccggaagtgatggaatctgcagtagcgttatcagtaccgctt
aaggtcgattactcttacggtgacacctggtatgatgcgaagtaa

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