Jeotgalibacillus malaysiensis: JMA_24340
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Entry
JMA_24340 CDS
T03570
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03030
DNA replication
jeo03430
Mismatch repair
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMA_24340
03430 Mismatch repair
JMA_24340
03440 Homologous recombination
JMA_24340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_24340
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_24340
Enzymes [BR:
jeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMA_24340
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMA_24340
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMA_24340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
HHH_3
DUF655
Flavin_Reduct
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJD91751
UniProt:
A0A0B5ANM8
LinkDB
All DBs
Position
complement(2242517..2245822)
Genome browser
AA seq
1101 aa
AA seq
DB search
MAFTHLQVTSAYSLLSGTMTVAELVAQAKREKLPALALTDHNTMYGVIPFYKACIKEGIK
PIIGLTADISGNDDQAFPLILLAETNEGYQNLIKISSAISTTAKPLPEKWLKSYAGGLIA
ITPGPDGEIERLLLNGQIDTAESRADQLMQMMGKDRFYLGLSRLNRPDDPALHSLIQSLS
SEANLPMAATAEVKYSEPADQTAYEALVALRDGLSVDEVKADGSYHFRSADEVESQLSDT
PEAIENTYRIAERCRVNIDFSASHLPVFPVPDDVTQKEVLAYLCEEGLKKRVDQVTDVYR
ERLKYELQIIDQMGFNDYFLIIWDVMKFAREQHILAGPGRGSAAGSLTAYALFITHVDPI
EHHLLFERFLNPERVTLPDIDLDFPDDRRDEVIQYTAEKYGRKKVAQIATFGTLSAKAVA
RDMARVYGMTTGEMEVISKSIPSLHGITLKEAYEQSESLKRFVNQSARYKDWFKTAMKLE
GLPRHTSVHAAGVIISDVPLAEVVPLQKGTDYAHITQWPMGALEEIGLLKMDYLGLRNLT
ILHRVIQSVRQSEPSFDIEKIPEDDKETFELLGKGWTSGIFQFEAEGVTKVLMTMKPSEF
EDLVAVNALNRPGPMEFIPQYIKRKYGHEKVPYIHQDLEPVLSSTYGIIVYQEQIMEIAS
RFAGFSLGQADVLRRAVSKKKKQDLDRERKRFTEGAVKKGYSSEAANELYDLIVRFADYG
FNRSHAVAYSKIGYQLAYLKAHYPVSFMAALMTTATGNEDKTAQYIKECRNLSITVQPPD
INKSMRYFKGEKGEIIYSLSAIKGVNKAAAENIITVRQEQPFRDFFDLCSRLNPKLVNRK
LLEPLIFSGALDSFGQDRSVLLASIEVAINHAGLVQGEGSLFEDLDIKPKHAKASPMPDE
QKLAHEKEVLGVYLSSHPVSVYRDRLTGSGALRIDEIRPGVKGMVGALLTEVRVIRTKKG
ENMSFVTLSDESGDMDGVVFPDVFRKQSPIIQKGMTLVLSGKTEERNRKNQFVVQHAVPA
DQYKGADRIKTLFLRIPESMDTKDTFNMIDQFCRKFAGEMPVVVYDAESGSKQKLSISIN
PANALLDRLIQLLGNENVVEQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacacatttacaggtcacaagtgcatacagcctgctgagcggcacaatgaca
gtcgctgaattggtcgcacaggctaaacgcgagaagctgcctgcacttgcgctgacagat
cataatacaatgtacggtgtgatccccttttacaaagcctgtataaaagaagggatcaaa
ccgattattggtctgactgctgatatcagcggaaatgatgatcaggcattcccattgatc
ctgctagctgaaacgaatgaaggctatcagaatctgatcaaaatttctagcgcaatctca
acgacagcaaagccgcttcctgaaaagtggctcaagtcatacgcaggaggattaatcgct
atcacacccggtcctgatggtgaaattgaacgtcttttgctaaatggacagattgataca
gccgagtcacgggcagatcagctcatgcagatgatgggaaaagaccggttttatctgggg
ttatctcgtctgaaccggcctgatgatccagcgcttcactcgttaatacagtccctttcc
tcagaggcaaacctccctatggcggctaccgctgaagtgaaatatagcgagcctgccgat
cagaccgcttatgaagcgctggttgctcttagagacggtttatcagtagatgaagtaaaa
gctgacgggagctatcatttccgatcagctgatgaggttgaaagtcagctctcagatacg
cccgaagcgattgaaaatacatacagaattgctgagcgctgccgggtaaatattgatttt
tctgcctcacacctgcctgtttttccagtgccggatgatgtgacgcaaaaggaagtactt
gcctacctttgtgaagaaggacttaaaaagcgcgtggaccaggtaacagatgtctatcgc
gagcgtcttaaatacgaattgcaaatcattgatcagatgggctttaatgattatttcctg
attatctgggacgtgatgaagtttgcgcgtgaacagcatattttagcagggcccggtcgt
ggatcggccgcaggatctttaaccgcttatgcgttatttattacacacgtggatccgatc
gaacatcacttactgtttgaacgttttttaaatcctgaacgtgtcacgcttccggatatt
gatcttgattttccggatgaccgccgtgatgaagtgattcaatatacagctgagaaatac
ggcagaaagaaagtagcgcagatagcaacgtttggaacactttctgcaaaagctgtggca
cgtgatatggcaagggtttacggcatgactaccggggaaatggaagtgatctcaaaatca
attccatctcttcacgggattacactgaaagaagcatacgagcagtcggaatcgcttaaa
cgctttgtgaatcagtcagcgcggtataaggactggttcaaaacggctatgaagcttgaa
gggcttccgcgacatacatctgttcacgcagcaggcgtaataatcagtgacgtcccgctt
gcagaagttgtaccgcttcaaaaaggcacggactatgcccatattactcaatggccgatg
ggcgctttagaggagattggacttttaaagatggattacctggggctcaggaacctgacg
atcttacaccgggtcatccagtcagtcagacagagtgaaccttcatttgatatcgaaaag
atccctgaagatgacaaggaaacgtttgagctgctcggcaaaggctggacaagtggtatt
tttcaatttgaagcagaaggtgttacaaaagtactgatgacaatgaagccgtcagagttt
gaagatcttgtggcagtcaacgcgttaaaccgtccgggaccaatggaatttattcctcaa
tatataaagagaaaatatggtcacgaaaaggttccttatattcatcaggaccttgaacct
gttttatcctcaacgtatggcattattgtctatcaggagcagatcatggagattgcttca
aggttcgcaggattctcactcgggcaggcagatgtactgagaagagcagtcagtaagaag
aaaaagcaggaccttgaccgtgaacgaaagagatttactgaaggtgctgttaaaaaaggc
tattcaagtgaagcagctaatgaactgtatgatctgattgtcagatttgctgattatggt
tttaaccggagtcacgctgttgcttacagtaagattggttatcagcttgcctacctgaaa
gcacactacccggtttcatttatggcggcactgatgaccactgcgacaggaaacgaagat
aaaacagcacagtatataaaggaatgcagaaacctttctattacagtacagccgcctgat
attaataaaagtatgcggtactttaaaggtgaaaaaggtgaaatcatctacagtcttagt
gcaataaaaggtgtaaataaagcggcggctgaaaacattatcactgtcaggcaagaacag
cccttccgcgacttttttgatctctgcagcaggctgaatccgaagcttgttaacagaaag
ctgcttgaaccgctgatcttttcaggtgcactcgacagctttggtcaggaccgctctgta
ctgcttgcctcgattgaagtggcaattaatcatgcaggactggtgcagggagaaggcagc
ttgtttgaggatcttgatattaagcctaagcacgctaaagcttcacctatgccggatgaa
cagaagctggctcatgaaaaagaagtactcggtgtttacttatcctcacatcctgtgtcc
gtctaccgggacaggctgacaggctcaggggcactcagaattgatgagatcaggcctggg
gtgaaaggaatggttggtgcacttttaaccgaagtgcgtgtgatcaggacaaaaaagggt
gagaatatgagttttgttaccttgagcgatgagtcaggggatatggatggtgtcgtgttt
ccggatgttttcagaaaacagtcccctattattcaaaaagggatgacactcgtgctgtca
ggaaaaacagaagaacgcaataggaaaaatcagtttgtcgttcagcatgcggtccctgcg
gatcagtataaaggggcggatcgcataaaaaccctttttttaagaattcccgaatcaatg
gatacgaaggatacttttaacatgattgatcagttctgcagaaaatttgcaggtgaaatg
ccggttgttgtatatgatgcagaatccggcagtaagcagaagctcagcatcagcattaac
cctgctaatgcgctattagacaggctaattcagctgcttggaaatgaaaatgtcgtcgaa
caataa
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