Jeotgalibacillus malaysiensis: JMA_41650
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Entry
JMA_41650 CDS
T03570
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03410
Base excision repair
jeo03430
Mismatch repair
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMA_41650
03430 Mismatch repair
JMA_41650
03440 Homologous recombination
JMA_41650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_41650
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JMA_41650
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JMA_41650
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JMA_41650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJD93482
UniProt:
A0A0B5AXP5
LinkDB
All DBs
Position
unnamed:complement(354650..356371)
Genome browser
AA seq
573 aa
AA seq
DB search
MKNVLWTRPTESTTRSLELMKLQEARELRHFSKSVIEVLYNRGLKTVEAIEDFFDNDPSK
VHSPLLMTDMQKAVDIIKDAIEKKLKLVIYGDYDCDGASATAIGMLGLRKAGANVEYFIN
NRFEHGYGLNVKGMDDLLKEYPDVDLILTVDNGIVAYEGIDYAVSKGVRVVVTDHHDPHP
TGKMPNAEAIVNPKRPGDAYPFKGICGATVIYKFMQALYYEMDLDMDEVEDLVDIVGMAT
IGDVMPLLDENRIFVKQALKRVKMGTRPAFAKLVEKTNVTTIDEETFGFKFVPMVNAPSR
LLGDIDLAVDLFLTEDEAEMEGLVDELIRLNEERKEITARQEEIAMAMIEKMGEQSVYVL
YNPEFHEGIVGLIAGRIKEKFYRPAIVLTEHHGIAKGSGRSIEGFHINDALHANADALIG
FGGHAGACGMSLDIKKVDELRERIIATAESILSEDDLTPKIVIDAMVNASDLTIDYIDEL
DTLRPFGQAFPKPVLKLQDFKGKNVLYMGKEKNHLKVSGYGKVSLVMFSYAEDFKKQGEP
NTVEAIGYPALNVYRGDVSVQFMVQENHIRPAS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtactatggacaagaccaactgaatcaacgactcgctcactcgaattgatg
aaactccaagaagctcgggaacttcgtcacttctctaagagcgtcatcgaagtgctttac
aaccgggggcttaaaacagtagaagccattgaagatttctttgacaatgacccgtcaaag
gttcactcgccacttttaatgaccgacatgcaaaaagccgttgacatcattaaagatgcg
attgagaagaaattgaaattggttatttatggagactatgattgtgatggagcatctgca
acagctatcggaatgctaggacttcgtaaagccggtgcaaacgtagagtactttatcaac
aatcgttttgaacacggttatggcttaaatgtaaaaggaatggatgacctattaaaagaa
tatcctgacgttgaccttatcttgacggttgataatggaatcgtggcttatgaaggcatt
gattatgcggtatcgaaaggtgtccgtgttgttgtcactgaccaccatgaccctcatcca
acaggcaaaatgccgaatgctgaggcaattgtgaatccgaagcgaccaggagatgcttat
ccatttaaaggaatttgtggtgctacggttatctacaagtttatgcaggctctctattat
gagatggatttggacatggacgaagtggaagacctagtcgatatcgtcggcatggcaacc
attggtgacgtgatgccacttctcgatgagaaccggattttcgtcaaacaggctttaaaa
cgagtaaaaatgggtacacgccctgcgtttgcgaagctcgtagaaaaaacaaacgtcacg
acaattgatgaagagacttttggattcaaatttgttccaatggtcaacgcaccaagccgt
cttctgggagacattgaccttgcggttgatttattcttaacagaagatgaagcggaaatg
gaaggtttggtggatgagctcattcgtttgaatgaagaacgtaaagaaatcacggctcgc
caagaagagattgcgatggcaatgattgaaaagatgggggaacagagtgtctatgtcctt
tataaccctgaatttcatgaagggattgtcggcttgattgccggacgcattaaagaaaaa
ttctatcgtcctgcgattgtcctcacagaacaccacggcattgccaaaggttctggacgt
tcgattgaagggttccacattaacgatgcgttacatgcgaatgcggacgccctcattggc
tttgggggacacgctggagcttgtgggatgtcactcgatatcaagaaggtagatgaactt
cgtgagcggattatcgcaacagctgaatctatcttgtcagaagatgatttgacaccgaaa
attgtgattgatgcaatggttaacgcatccgaccttacgattgactatatcgatgaactt
gatacacttcgcccgtttggtcaagcattcccgaaacccgttttgaaattgcaagacttc
aagggcaagaatgttctctatatgggtaaagaaaagaatcacttaaaagtttctggatat
ggaaaggtatcacttgtgatgttcagttatgctgaagacttcaaaaagcaaggagaaccg
aatacagtagaagccatcggctatccagcattaaacgtttatcggggtgatgtatccgtc
caatttatggtacaggaaaatcacattcgaccagcttcttaa
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