Jeotgalibacillus malaysiensis: JMA_42230
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Entry
JMA_42230 CDS
T03570
Name
(GenBank) DNA topoisomerase (ATP-hydrolysing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
jeo
Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_42230
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_42230
Enzymes [BR:
jeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JMA_42230
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Topoisomerases
JMA_42230
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JMA_42230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
bHLH_PER
Motif
Other DBs
NCBI-ProteinID:
AJD93540
UniProt:
A0A0B5ATJ7
LinkDB
All DBs
Position
unnamed:422292..424520
Genome browser
AA seq
742 aa
AA seq
DB search
MSKKNKKAVTPIREEITNFSYEDEMKQSFMDYAMTVITDRALPDVRDGFKPVHRRILYAM
RAMNVMPDKPHKKSARIVGDVLGKYHPHGDSAVYEAMVRLSQDFRVRVPLVDGHGNFGSI
DGDKAAAMRYTEARLTEEALYMLQDLEKGVVDMKENFDGSEQEPVVLPALIPQLFINGTA
GIAVGMNTNIPSHNPSEIIDATLHLIKKPKATLDDLLTFVKAPDYPSGGIIINADDMREM
YQTGQGKVMIRSKISVEPGQYGKTNLIVEEIPYTYSGNKEKLVNDIIDMVVNTKKIPEIS
DIRDESDHKIRIVIEVKKGVDTDKFLHKLYRLTGLQDQENYRFIALVDGKPEYVGLLDYL
HHFLAFQKEVYTKRYQYLLPKAEARKELLEGFIKAVPVMDAIIEVVRGAKDVKQMKSCLV
GGDVTGIDFTLKKHEKTASKFQFTPTQAQAILDMKLQKLGKLEVLQIQKEYDVLVKEIEF
YQAVLSDEKKLMKEIQKTLQEYKKKFPQERKTLVTNKETKVYKEEVKVVDVTVQVDKFGY
VKALEGQADESDETIRQTMTVKSDDRLVALTTDGMAVQLKVADIPKGKAKDRGKPLQVLT
NMEKTEASLYLTPMTELLESTLLIVTKNGFVKRIEGKEFETNRSSILAHKLEDNDKLVFV
GKETDEMVMVSKEEKVLRFKTSEIPLAKRSAKGVVGMKLKEHDEIILCHAVTDDDQRIEY
MGNNILLSDIECSKRARSGKKL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaaacaaaaaggcggttacgccgattcgagaagaaattacgaattttagt
tatgaagatgaaatgaagcaatcctttatggattacgctatgaccgtcatcacagaccgt
gcattgccggatgtgagggatggatttaaaccggttcacagacggattttatatgctatg
agagcaatgaatgtcatgccggataagccacataaaaaatcagcacgtatcgttggggat
gtcttaggtaaataccacccgcatggagattctgctgtttatgaagcgatggttcgcctt
tcccaggacttccgtgttcgtgtcccgctcgtcgatggtcacggaaactttggttcgatt
gatggagacaaagcggcggcaatgcgttacaccgaagcacgcctcaccgaagaagccttg
tatatgctccaggatttggaaaaaggtgtcgtagacatgaaggagaacttcgacgggagt
gaacaagagcctgttgtccttccagctttgattcctcaactctttattaatggaaccgca
gggattgcagtcggaatgaataccaatatcccatctcacaatccttccgaaatcattgat
gctacgttgcatctgattaaaaaaccaaaagcgacactcgatgatttgttgacgtttgtg
aaggctccagactatccatctggtggtattatcatcaatgcagatgatatgcgagaaatg
tatcagacgggtcaagggaaagtgatgattcgttctaaaatttcggtggagccaggtcaa
tacggaaagaccaatctgattgtggaagaaattccttacacctattcgggtaacaaagag
aaacttgtgaacgacattattgatatggtggtaaacactaaaaagattccagaaatcagt
gatattcgggatgagagtgaccataaaattcggattgtgattgaagttaaaaaaggtgtt
gatacggataaatttttgcataagctctatcgtttgacggggcttcaagaccaagaaaat
tatcgcttcattgcgttagtggatggaaaaccggaatacgtcgggttgttagattacctt
catcattttctcgccttccaaaaagaggtctacacgaaacgctatcagtatctccttcct
aaagcagaggcacgaaaagagttgctcgaaggattcatcaaagctgttccggtaatggac
gctattattgaagttgtccgtggagcaaaagatgtgaaacagatgaaatcctgtcttgtt
ggtggggatgtgaccgggattgactttacgttaaagaagcatgaaaaaacggcatctaaa
ttccagttcacaccgacacaagctcaagcgattctcgatatgaaacttcaaaaactagga
aaacttgaagtccttcaaattcaaaaagaatatgacgttcttgtgaaagaaattgaattc
tatcaagctgttttatcggatgagaagaagctaatgaaagagattcagaaaaccttacag
gaatacaaaaagaaattcccacaagaacgcaaaacacttgttaccaataaagaaaccaag
gtctacaaagaagaagtgaaagtggtagatgtcacggttcaagtggataagttcggctat
gtaaaagctctagaagggcaagcagatgaatccgatgaaaccattcgccaaacgatgact
gtcaagagtgatgaccggttggttgcattgactacggatggaatggcagttcaattgaaa
gtggcggatattccgaaaggaaaagcgaaagaccgtggtaagccactccaagtgctgacc
aatatggagaagacggaggcatctctctatttaacgccaatgactgagctcttggaatca
acgttactcattgtaaccaagaacggatttgtgaaacgcattgaaggaaaagaatttgaa
accaatcgttcgagtatcctcgctcacaaactggaagacaatgacaagcttgtcttcgta
ggaaaagagacggatgaaatggtgatggtttcaaaagaggagaaggttctccggtttaaa
acatctgagattccgcttgcgaagcggagtgcaaaaggtgtcgtgggtatgaaattgaaa
gagcatgacgaaatcattttgtgtcatgcggttacagatgatgaccaaagaattgaatat
atggggaataacatcctcttatctgacattgaatgttctaaacgagcacgaagtggcaaa
aaactgtaa
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