Jeotgalibacillus malaysiensis: JMA_42820
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Entry
JMA_42820 CDS
T03570
Name
(GenBank) DNA-dirted DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03030
DNA replication
jeo03430
Mismatch repair
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMA_42820
03430 Mismatch repair
JMA_42820
03440 Homologous recombination
JMA_42820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_42820
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_42820
Enzymes [BR:
jeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMA_42820
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMA_42820
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMA_42820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJD93599
UniProt:
A0A0B5B084
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All DBs
Position
unnamed:478835..479968
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AA seq
377 aa
AA seq
DB search
MTVCKNRGIAVLSPDVNYSMQDFSVDGKSIRFGFGGIRNMGSYGELIIEERDQNGLFTSL
YNFIERMSISHGINRRRIEALIYSGALDSFPGTRQEKLNMIDVFTGIASIAKGDRDNGTK
SLLSTSLFTPMYDKFFTLTGAREMSEKLRLEKEREYTGFYVSGHPLNEYESVFKNPSIKN
FYSIQQILPNSIDSEDGVEEDIVFENAFDGEMVRIAGVVQELEVRETKSHQLMANIVIED
VSASVKGIIFPTIYSQNVHRLKNGEVLAFYGKIEVSEFGTQFLVNGIETMDELMTPDSVA
NLTLYLDSDLSEARYEFEELMNIFEKSDTPNRIPVTIVMGGKTYSTRQGKAILGNTKLAT
IIKLQELLGRNSVQVQY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacggtctgtaagaaccgtggtattgcggttctctctccagatgtaaactactcaatg
caagacttctctgtagacggaaaatctatccgcttcggtttcggtggtattcgtaacatg
ggttcatatggtgagcttatcatcgaagaacgagaccaaaatggcttattcacaagcctg
tacaacttcattgaacggatgtcgatttcacacggtatcaaccgtcgtcgtatcgaagct
cttatctattcaggagctcttgattcattcccaggaacacgtcaagaaaaactcaatatg
attgatgtctttaccggtatcgcaagcattgcaaaaggtgaccgtgacaacggaacaaaa
tcgcttctttcaacctctttgttcactccaatgtacgataaattcttcacattgacaggt
gcacgtgaaatgtctgaaaagcttcgccttgaaaaagaacgagaatatacaggattttat
gtatcgggtcacccgttaaatgagtacgaatcggtctttaaaaatccaagcatcaaaaac
ttctattcgattcagcagattcttccgaactcgattgattctgaagatggagtggaagaa
gatattgtctttgaaaatgcgtttgacggagagatggttcggattgccggagtggtacag
gagcttgaagtgcgtgagacaaagagtcatcaactcatggcaaatatcgtcattgaagat
gtttctgcaagtgtcaaggggattattttccctacgatttactctcaaaatgtccaccgc
ttgaaaaatggggaagttctcgcattctacggcaagattgaagtcagtgaattcggaaca
caattccttgtaaacggcattgaaacaatggatgaattaatgacgccagactctgttgcc
aatttaacactctacctcgattctgacctatcagaagcaagatatgagtttgaagagttg
atgaatatctttgaaaagtctgatacgccaaaccgaatccctgtcacgattgtcatggga
gggaaaacgtattcgacccgacaaggaaaagcgattctaggaaatacgaagcttgcgacc
atcatcaaattgcaagagttgttgggcagaaattctgttcaggttcaatactaa
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