Jeotgalibaca sp. PTS2502: BW721_00040
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Entry
BW721_00040 CDS
T04689
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
jep
Jeotgalibaca sp. PTS2502
Pathway
jep02020
Two-component system
jep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BW721_00040
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BW721_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jep03021
]
BW721_00040
Transcription machinery [BR:
jep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW721_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF5789
Motif
Other DBs
NCBI-ProteinID:
APZ48210
LinkDB
All DBs
Position
complement(7788..9086)
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AA seq
432 aa
AA seq
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MQFNQHYTQKQTQKQQFIPNLVQGMEMLQLNRMELDTYLNRVMLGNPFIEMNLADPLKIS
SKKRSHNDLSHIIEQTSIYEASLHDFLHEQIYLLYRDTPLRQLMFWWVDQLDERGYVTKN
LDEAMAETNASQIELLDSLTLLQQLDPPGIGARSVQECLMIQTERMDFAPEIAYLVLEEH
YDELIQKKWSVIAEDYGVSLSDIEDVYSFIQRLSLSPAEHYESRSKATPYIIPELMVDLN
DGQLVVAETRYKTPLLTLNLTYLEDMKAVDDKEVQAYVRTKKQEFDQLQASLMKRKDTIL
KVGTAVLIHQQDFFLDPNNHLKPLQLNDVAQLCQLSESTISRTVRDTFVQTPRGVFELRS
FLSRRMEGLNQSKDEVMEHVKQLIADEDKHKPLSDQKLEHLLKEKGMTVSRRAIANYRKQ
LQIPSSTDRKIK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaatcagcattatacgcagaaacaaactcaaaaacagcaatttatccctaat
ttagtacaaggcatggaaatgctccaacttaatcggatggaactggatacttatttaaac
cgcgtaatgttgggtaatccttttattgagatgaacttagctgacccattaaaaatctca
agtaagaaacggtctcataacgacctctctcatattattgagcagacatctatttatgaa
gcctctctgcatgactttttacatgagcaaatttatttactgtatcgagacaccccattg
cgtcagctgatgttttggtgggtagatcaactcgatgaacgtggctatgtgacaaaaaac
ttagatgaagcgatggcagaaacgaacgctagtcagattgaactcttagatagcttaacc
cttttacagcaattggacccgcctggcatcggcgcacgatcggtacaagagtgtttaatg
attcaaactgagcgtatggattttgcgcctgaaatagcttacttagttttagaagagcac
tacgatgagcttattcagaaaaaatggtcagttatcgcagaggactatggtgtttccctt
tcagatattgaggatgtttacagctttatccaacgattatcgctatcgcctgcagaacac
tatgagtcacgctcaaaggcaacgccttatatcatacctgaactgatggttgacctcaat
gatggccagcttgtcgtagcagaaacgcgttataaaacgccactactcacattgaatctc
acctatttagaagatatgaaggcggttgatgacaaagaagttcaagcttacgtgcgaacg
aaaaagcaagagttcgaccaacttcaagccagtctcatgaaacgaaaagacactatttta
aaagtcggcactgccgttttgattcaccaacaggatttctttcttgatcctaataatcat
ttaaaacccttgcagttaaatgatgtggctcagttgtgtcaactgagtgaatcaaccatc
agtcgaacggtcagagacacctttgtccaaacccctcgtggtgtgtttgaattgcggtct
ttcctttcacgtcgaatggaaggacttaatcaatcaaaagatgaagtgatggagcatgtg
aaacagctgattgctgacgaagacaagcacaagcccctatccgatcaaaaactggaacac
cttttaaaagaaaaaggcatgacagtatcgcgtagagcaattgctaactaccgaaaacaa
ctccaaattccgtcatcaaccgatcggaaaattaaataa
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