Jeotgalibaca sp. PTS2502: BW721_03915
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Entry
BW721_03915 CDS
T04689
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
jep
Jeotgalibaca sp. PTS2502
Pathway
jep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW721_03915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jep03019
]
BW721_03915
Messenger RNA biogenesis [BR:
jep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BW721_03915
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
UPF0154
KH_2
Neur_chan_memb
DUF3149
MctB
Motif
Other DBs
NCBI-ProteinID:
APZ48893
UniProt:
A0A1U7EBA9
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Position
complement(798277..799836)
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AA seq
519 aa
AA seq
DB search
MGLIEIAFAIIALIIGVVIGYFYRKSNHEKELAGARNTATSILEEAAKDAETMKKEAMLE
AKEESHQYRSTIEEELRERRNDVLKQENRMIQKEENLDRKENTLSKREKTIENKEENLAK
RNQTLTSEENRIQTIIEEQQQELERIATMSREDAKAIIMKETEEQLTYERAVLVKESEQR
AKDESERKAKNIILQAIQRSSADLVSEATVTVVTLPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGFDPIRRETAKIALERLIQDGRIHPARIEEAVDRARKEMDERIRE
IGEQATFEVGIHSLHPDLIKILGRMYFRTSYGQNVLNHSIEVAKLAGVMAGELGEDITMA
KRAGLLHDIGKALDHEIEGSHVEIGAEIAQRYKENAIVVNAIASHHGDVEPTNIISILVA
AADALSAARPGARSESLENYIRRLERLEGIANEFDGVSSSFAIQAGREIRIMVSPENVDD
SHAILLARDIKTKIEEELEYPGHIKVTVIRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggattgattgaaattgccttcgctatcatagctttaattattggtgtcgttatcgga
tacttttatcggaaatcgaatcatgaaaaagagcttgccggtgcaaggaatacagcaacc
tcaattttggaagaagcagcaaaagatgctgaaaccatgaaaaaagaggccatgttggaa
gcgaaggaagaaagccatcaataccgttcaacaattgaagaagaacttcgagaaagaaga
aatgacgtactcaaacaagaaaatcgcatgattcaaaaggaagagaatttggatcgaaaa
gagaatactttatccaaacgtgaaaagacgattgagaataaggaagaaaatcttgcaaag
agaaatcaaacattaacttctgaagaaaatcgaattcagactattattgaagaacaacaa
caagagctagaaagaatcgctaccatgtcacgagaagatgcaaaagctatcattatgaag
gaaactgaggagcagttaacttatgaacgagctgtcttagttaaagagtcagaacaacgt
gcgaaagatgaatcagaacgtaaagctaagaatattattttacaagcgattcaacgtagt
tcagctgatcttgtgtctgaggcaactgttacagttgtgacacttccaaacgatgatatg
aagggtagaattatcggacgagaaggacgtaatattcgtactttagaaacactaacaggg
attgatttgattattgatgatacacctgaagcagtcgttctaagtggatttgatccaatt
cgtcgtgaaactgctaagattgcattggaacgtttaattcaagatggacggattcatccg
gctagaattgaagaagctgttgatcgcgcccgcaaagagatggatgaacgcattagagaa
atcggtgaacaagcaacctttgaagttggtattcactcattacatcctgacctaattaag
attcttggaagaatgtatttccgtacaagctacggacaaaatgttttaaatcatagtatt
gaagttgcaaaattagctggtgtaatggctggcgaattaggcgaagacattacgatggct
aagcgagcaggcttgcttcatgatattggtaaagcgcttgatcatgaaattgaaggatca
cacgttgagattggtgcagaaattgcccaacgctacaaagaaaatgccattgttgtgaat
gcgattgcctctcaccatggagatgttgaaccaactaatattatttctattttagttgca
gcagcagatgcgctgtcagctgcccgacctggagcaagaagtgaatcacttgaaaattat
attcgcaggctggaaagattagaaggaattgcaaatgaatttgacggagtttcaagtagt
tttgcaatccaagcaggacgagaaataagaattatggttagccctgagaatgttgatgat
tctcatgcgatcttattagcacgcgatattaaaacaaaaatcgaagaagagctagaatat
ccgggacacatcaaggttacggttatacgcgaaaccagagcaatagaatatgcaaaataa
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