Jeotgalibaca sp. PTS2502: BW721_04070
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Entry
BW721_04070 CDS
T04689
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
jep
Jeotgalibaca sp. PTS2502
Brite
KEGG Orthology (KO) [BR:
jep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jep03019
]
BW721_04070
03009 Ribosome biogenesis [BR:
jep03009
]
BW721_04070
Enzymes [BR:
jep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW721_04070
Messenger RNA biogenesis [BR:
jep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW721_04070
Ribosome biogenesis [BR:
jep03009
]
Prokaryotic type
rRNA helicases
BW721_04070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Helicase_RecD
CMS1
Ketoacyl-synt_C
Radical_SAM
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
APZ48922
UniProt:
A0A1U7EBI4
LinkDB
All DBs
Position
complement(832033..833358)
Genome browser
AA seq
441 aa
AA seq
DB search
MNFKQYNFQPFIEDALEELGFKEPTDIQQRIIPIIQANKSVVGRSQTGSGKSHSFLLPII
NKVDATKDDVQTVITAPSRELAEQLYQVALQLAAHAEQEIRIVNYVGGTDKKRQLEKLEN
SQPHIVIGTPGRILDLINEQGLKVHTASTFVVDEADMTLDLGFLHDVDQIAGRLPKDLQM
LVFSATIPQKLQPFLMKYMEKPQVINLEPKNIIAPSITNYLLPAKGKSKMAVLEDVLGVG
QQYFTLIFANTKQTVNEIADSLKEKGYDCAVLHGDVPARERKRIMRRVHNLEYQLMVATD
LAARGIDIEGVSHVINYEIPKDSDFFVHRIGRTGRNNLPGTAITLYSPDEEKAVNELEGI
GIHFQTVRIKDGGFEEVDDRRNRDRDRKLPKSQTEADPRIRGMVKKAKKKVKPNYKRKLN
DQIKKQLKKNKGTDFNRKKKK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaacaatataactttcagccttttattgaagatgctcttgaagaattaggg
tttaaagaaccaactgatattcaacaacgtatcattcctattattcaagccaataaaagt
gttgtcggtcgatcgcaaacaggatcgggaaaaagccatagtttcttattgccgattata
aacaaagtagatgctacaaaagatgacgttcaaacagttatcactgcgcctagccgtgag
ctagctgaacaactctatcaggtagcattacaattagccgctcatgctgaacaagaaatc
agaattgttaattatgtgggcggaacagataaaaaacgtcaattagaaaaattagaaaac
agccaaccacatattgttattggaacaccaggccgtattttagatttgattaatgaacaa
ggattaaaagtccatacagcgtcaacctttgttgtcgatgaagcagatatgaccctagat
ttaggatttttacatgacgttgatcaaattgctggtcgattaccgaaagatttacaaatg
ttagttttctcggcaacgattcctcaaaaactacaaccattcctaatgaagtatatggaa
aaaccacaagtgattaatctagaacctaaaaatatcattgcaccatctattacaaactat
ttgttaccagcaaaagggaaatctaagatggctgtattagaagatgttttaggagttgga
caacagtactttaccttaatatttgctaataccaaacaaactgttaacgaaattgctgat
agcttgaaggaaaaaggctacgattgtgctgttttacatggagatgtaccagctcgtgaa
cgtaaacgaattatgagacgtgttcataatttagaataccaactaatggttgcaacggac
ttagcagctcgtgggattgatatcgaaggtgtgtcacatgttatcaactacgagattcca
aaagatagtgactttttcgttcaccgtattggccgtactggacgtaataatttaccggga
actgcgattaccctctattcgccagatgaagaaaaagcagtgaatgaattagaaggaata
ggtattcatttccagactgttcggattaaagatggtggctttgaagaagttgatgaccgt
cgtaaccgtgatcgtgaccgcaagttgcctaagagccaaactgaagcagatccacgtatt
agaggtatggttaagaaggctaagaaaaaagtaaaaccaaattataagcgtaaattaaac
gatcaaatcaagaagcaattgaaaaagaataaaggtaccgatttcaatcgtaagaaaaag
aaataa
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