Jeotgalibaca sp. PTS2502: BW721_05350
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Entry
BW721_05350 CDS
T04689
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jep
Jeotgalibaca sp. PTS2502
Pathway
jep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BW721_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jep03400
]
BW721_05350
Enzymes [BR:
jep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BW721_05350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BW721_05350
DNA repair and recombination proteins [BR:
jep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BW721_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Auto_anti-p27
Zn_ribbon_6
Lenti_VIF_2
Zn_ribbon_TFIIB
RNHCP
Zn_ribbon_IS1595
DNA_ligase_ZBD
DZR_2
Cas12f1-like_TNB
zf-CHCC
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
APZ49161
UniProt:
A0A1U7EBM7
LinkDB
All DBs
Position
complement(1093877..1094728)
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AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGLNQTIAHSTISHVDVFWSRMITPPFSSEKFKDVLAGETIHTVERRGK
YLIFLLDNWVMVSHLRMEGKYEVVDSKEDYKKHTHVVFHLSDGRDLRYLDVRKFGRFSLV
PIDKQDDYEPFKKLGPEPTAESFRFSDFKQRLSRTSRAIKTVILDQHVVAGVGNIYADES
LFEAGVHPQKPANELNETESRQLHQAIIAVIGRAVSAGGSTIRTYKNSFGEEGHFQIYLN
VYGKKNQACPRCGTPIEKIKVGQRGTHFCPNCQYYASEQEGDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtagaagttgttcgcagaggattaaatcaaacgattgcccat
tcgacgattagtcatgtggatgtcttttggagtcgcatgattacaccaccattttcatct
gaaaaatttaaagacgtattagctggtgaaaccattcatacggttgagagacgaggcaaa
tatttgattttcctattggataattgggttatggtgtcccatttgagaatggaaggcaaa
tacgaagtcgttgacagtaaggaagactataaaaagcatacccatgtggtttttcatcta
agtgacggcagggatttgcgttaccttgatgtgaggaaatttggtcgtttttcacttgta
cccattgataagcaagatgattacgaaccctttaaaaaattaggtccagaaccaacagca
gaaagtttccgtttttcagattttaaacagcgcttatctcgtactagtcgtgccattaaa
acggttattttagaccagcacgtggtggcaggtgtcggcaatatttatgcggatgaatcg
ttatttgaagcaggtgttcatcctcaaaaaccagccaatgagctgaatgaaacagaaagt
cggcaacttcatcaagctattatagcggttattggccgtgctgtttcagcaggcggttcg
actatccgaacctataaaaacagctttggtgaagaagggcatttccaaatttatttaaat
gtttatgggaaaaagaatcaagcttgtccacgttgcggcacgccaattgaaaaaataaaa
gtcggccaaagaggcactcatttttgtcccaactgccagtattacgctagtgaacaagag
ggggacaaataa
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