Jeotgalibaca sp. PTS2502: BW721_09600
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Entry
BW721_09600 CDS
T04689
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
jep
Jeotgalibaca sp. PTS2502
Pathway
jep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW721_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jep03021
]
BW721_09600
03019 Messenger RNA biogenesis [BR:
jep03019
]
BW721_09600
Transcription machinery [BR:
jep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BW721_09600
Messenger RNA biogenesis [BR:
jep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BW721_09600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
S1CSD-TOTE-2
AAA_22
Ribosomal_L7Ae
SAP30_Sin3_bdg
NACHT
Motif
Other DBs
NCBI-ProteinID:
APZ49866
LinkDB
All DBs
Position
1907333..1908592
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AA seq
419 aa
AA seq
DB search
MEDMLSLQELEQKTLKEIYTYAKEYKIPYYSQMTKKELAHAVIRAQEEKQGFFMTEGVLD
IISQEGYGFLRPINYSPSQEDIYISSSQIRRFDLRNGDKVGGKARPPKASERYYGLMQVN
SVNGRNPEEAKERSHFPGLTPIYPDKKIVIETSQKNLSNRMIDLISPIGFGQRGLIVAPP
KAGKTTLLKAIANGIKTNYPDVELIMLLIDERPEEVTDIERSVDGDVVYSTFDQQPSNHV
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAALYRPKRF
FGAARNIEDGGSLTILATALVDTGSRMDDMIYEEFKGTGNSEIVLSRELAERRIFPAIDI
KKSGTRREESLLTTKEMEGIWKLRKTMRGDALEYTEEFLKQLRTTKNNEEFSTRISLMK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatgttatcccttcaagaactggaacagaaaaccttgaaagagatttatacc
tatgccaaggaatataaaattccttattatagccagatgaccaaaaaagaacttgcccat
gcggtgattcgtgctcaagaagaaaaacaaggcttctttatgacagaaggtgttctggat
attatctctcaagagggctatggctttttgcgaccaatcaactattcgccgagccaagaa
gatatttatatatcgtcttcccaaattcgccgatttgatttgagaaatggtgacaaagta
ggcggtaaagcgcggccacccaaagcatctgaacgttattatggactaatgcaagttaat
agcgtgaatggtagaaacccagaagaagctaaggaacgctcgcatttcccaggcttaacg
cctatttatcccgacaaaaaaattgtcattgaaaccagtcaaaaaaatctatccaaccgc
atgattgatttgatttcgccaatcggctttggtcaacgtggcttaattgtcgcgccacct
aaggcaggaaagacaaccttattgaaggctattgccaatggtatcaagaccaattatcct
gatgtcgaattgattatgctcttgattgacgagcgtccagaagaagtaactgatattgaa
agaagtgtagatggtgacgtggtttattcaacctttgaccagcaaccatctaaccatgtt
cgcgttagtgaattagttttggaacgtgccatgcgtctagtcgaagataaacgcgatgtc
gttattttaatggatagtattacccgtcttgcgcgtgcttataacttagtgattccgcca
agtggacgtacattgagcggtgggattgatccagctgcactttaccggccgaaacgcttc
tttggggcggcacgaaatatcgaggatggcgggagcttgactattttagcaacggccctt
gttgatacaggtagccgcatggacgatatgatttacgaagagtttaagggaacggggaac
tcagagattgtcttatcgcgtgaattggctgagcgtcgtattttcccggctattgatatt
aagaaatcaggaacgcgccgtgaggaatcgctgctgacgaccaaggaaatggaaggcatt
tggaagttgcgtaagaccatgcgtggcgatgccttagaatatacagaagaattcttgaaa
cagttacgtacgactaaaaataatgaggaattctcaacccgcatttctttaatgaaataa
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