Jeongeupia sp. HS-3: JHS3_01150
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Entry
JHS3_01150 CDS
T08604
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
jes
Jeongeupia sp. HS-3
Pathway
jes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHS3_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jes03019
]
JHS3_01150
Enzymes [BR:
jes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JHS3_01150
Messenger RNA biogenesis [BR:
jes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHS3_01150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCL74379
UniProt:
A0A7I8ECE7
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All DBs
Position
105247..106629
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AA seq
460 aa
AA seq
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MSFSTLGLAREVQQAVEAMGYETPTPIQSKAIPLVLAGRDLLGAAQTGTGKTAAFTLPIL
TLLAPYASNSVSPAKHPVRALILTPTRELADQVGENVKTYSQFMPLRSHIVFGGVDIKAQ
IPALRAGVEVLIATPGRLLDHVQQKSVNLSQVEILVLDEADRMLDMGFILDIKKIISMLP
KRKQTLLFSATFSAEIKKLSAEFLNNPELVEVARQNATNDNVEQVMHPCETHRKPALLAN
LIRTHKMGQVIVFNRTKQGADSVARELKRGGFDCEAIHGDRDQRSRLETLQRFKDGTLQI
LVATDVAARGLDISELPYVVNFELPNNPEDYVHRIGRTGRAGATGVAISLVDPGEDKAYA
LIQKLIKKELPLTPVPGYSPGTTPIQVQAERPNRGERRHPEARRDSVEARAAAPAPAAAP
VRHRGDVEVALPTKPLPTLPKRGQQIAALFLPPKHPVSHK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcgaccctgggcttggcccgggaagtacagcaggccgtcgaggccatgggt
tacgaaaccccgacgccgatccagtccaaagccattccgctggtgctcgccggccgtgac
ttgctcggtgccgcgcagaccggtaccggcaaaaccgccgcgttcaccttgcctatcctg
acgctgctggcgccctacgccagcaatagcgtgtcgccggccaagcatccggtgcgtgca
ctgatcctgacgccgacgcgcgaactcgccgatcaggtcggcgagaacgtcaaaacctat
tcgcagttcatgccgctgcgcagccatatcgtgtttggcggtgtcgacatcaaggcacag
attccggcgctgcgtgccggggttgaagtgctgatcgccacgccgggccgcctgctcgat
cacgtgcagcagaaatcggtgaatttgtcgcaggtcgagattctggtgctcgacgaagcc
gaccgcatgctcgacatgggcttcattctcgacatcaagaagatcatctcgatgttgccc
aagcgcaagcagaccttgctgttctcggcgacgttctcggccgaaatcaagaaactctcg
gccgagttcctcaacaatccggaactcgtcgaagtggcgcgccagaacgcgaccaacgac
aacgtcgagcaggtcatgcacccgtgcgagacgcatcgcaagccggcactgctggcgaac
ctgatccgcacccacaagatgggccaggtcatcgtcttcaaccgcaccaagcagggcgcc
gattcggtggcgcgcgagctcaagcgcggcggtttcgattgcgaagcgatccacggcgac
cgcgatcagcgctcgcgactggaaacgctgcaacgcttcaaggatggcacgctgcagatt
ctggtcgccaccgacgtcgccgcgcgcgggctggatatttccgagctgccgtatgtggtc
aacttcgagctgccgaacaaccccgaggattacgtccatcgcatcggtcgtaccggtcgc
gccggcgcgaccggggtggcgatctcgctggttgatccgggcgaggacaaggcctacgcg
ctgatccagaagctgatcaagaaagaactgccgctgacgccggtgccgggctattcgccg
ggcacgacgccgatccaggttcaggccgaacggccgaatcggggcgagcgccgtcatccg
gaagcccgccgtgacagcgttgaagcccgcgccgccgcgccggcacccgctgcggcgccc
gtgcgtcatcgtggcgacgtcgaagtcgccctgccgaccaagcccttgccgacgctgccc
aagcgcgggcaacagatcgcggcgttgttcctgccgcccaagcacccggtctcgcataag
tga
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