Jeongeupia sp. HS-3: JHS3_08640
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Entry
JHS3_08640 CDS
T08604
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jes
Jeongeupia sp. HS-3
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jes03016
]
JHS3_08640 (truB)
Enzymes [BR:
jes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JHS3_08640 (truB)
Transfer RNA biogenesis [BR:
jes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JHS3_08640 (truB)
Prokaryotic type
JHS3_08640 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HXXSHH
Motif
Other DBs
NCBI-ProteinID:
BCL75128
UniProt:
A0A7I8EB22
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All DBs
Position
932931..933839
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AA seq
302 aa
AA seq
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MAKRKIDGVLLLDKPFGITSNAALLKCRWLLSAEKGGHTGVLDPFATGLLPLCFGEATKF
AQRMLDADKGYRATIKLGQVSTTLDGEGEISDSGVAPTDPALITAALAQFTGEIEQVPPM
YSALKHQGKALYEYARQGVEIERPARKITIYSLTLESFADGVLVIDVLCSKGTYIRTLAD
DIGRVLGCGAYLTGLRRTKTAGFGIEQTVSLDAYIAMSLEEREACLLPADTLVQDMPSLS
LDVADMERIRHGMSVQRDGGWPDEGLFRLYAIPENGDNARFIGLGEVACDGVLRPKRLLA
TG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcaagatcgacggcgtgctgctgctcgacaagcccttcggtattaccagt
aatgccgcgctgctgaagtgccgttggttgttgtctgccgaaaagggcggccataccggc
gtgctcgatccgtttgcgaccgggttgttgccgctgtgttttggcgaggcaaccaagttt
gcgcaacgtatgctcgacgccgacaagggttatcgtgcaacgatcaagctcggccaggtc
tcgacaacgcttgatggcgagggcgagatcagcgacagcggcgttgcaccgaccgatccg
gcgttgatcaccgcggcattggcgcaatttaccggtgagatcgagcaggtgccgccgatg
tattcggcgctcaagcatcagggcaaggccttgtatgaatatgcgcgccaaggggtggaa
atcgagcgcccggcgcgaaagatcacgatttattcgctgacgcttgaaagctttgccgat
ggcgtgctggtgatcgacgtgctgtgctccaaggggacgtatatccgcaccctcgccgac
gatatcggtcgtgtgctcggttgtggcgcatacctgaccggcctgcgtcgtaccaaaacg
gccgggtttggtatcgagcaaaccgtgtcgctggatgcgtatattgcgatgtccctggaa
gagcgcgaggcgtgcttgctgccggccgacacgctggtgcaggacatgccgagtttgtcg
ctggatgttgcagatatggagcggatccggcatggcatgagcgttcaacgtgatggcggc
tggcctgatgagggcttgttccggctttacgctatcccggaaaatggggataatgctcga
ttcatcggtttgggtgaagtggcgtgcgatggtgtgctgcgacccaaacgactgctggcc
actggctag
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