Jeongeupia sp. HS-3: JHS3_19090
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Entry
JHS3_19090 CDS
T08604
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
jes
Jeongeupia sp. HS-3
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jes01011
]
JHS3_19090
Enzymes [BR:
jes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JHS3_19090
Peptidoglycan biosynthesis and degradation proteins [BR:
jes01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JHS3_19090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NMB0315_dom_I
LysM_OapA
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
BCL76173
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Position
2055676..2057232
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AA seq
518 aa
AA seq
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MRFPSLLGLLAGLSVASAVAAPQPRLNADGQLNNPQFFIADDTNRTVDILFGEVARLQSY
DDLWARVRAGFAMPELDDPLVEKWENYYASRPEYLNRIIERGGRYLYFVVDDVERRGMPM
ELALLPMIESAYNPKAESSAKAAGMWQFMPATGKQYGLERTWWYDGRRDVVAATDAALDY
LDKLHGQFNDWQLALASYNWGENAVARAQTKSAAAGLGMTYSDLRMPNETRNYVPKLMAV
RNIIANPAAFGVTLASVPNKPYFAAVSTGRHMDVQVAADLSETPVQELLKLNPGFIRPVI
AYKDDRKLVIPADKVAAFQRNLANYDKPLLNWQPYVTKRGESFAQLASQFGIDVSELKDI
NDIGSDGAARGQTILVPNVPGLDVSNRQTLVALHENRTADPIDTGASDAPLAVIKYRVAR
GDTLFNIASRYGMNVADLRKLNQLKADDVRLGSTLKVASVTRTASGKKAPIQREYVVKNG
DTLASIARKHRVDADDLKRWNPQKLSPGIRLVIYQPPA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcccctcactgctcgggctgcttgccggtctcagtgtcgccagcgcggtggcc
gcaccgcagccgcgactgaacgccgacggccaactgaacaatccccagtttttcattgcc
gacgataccaaccgtaccgtcgacattctttttggcgaggtcgcccgcctgcagtcctac
gacgatctgtgggcgcgggtacgcgccggttttgcgatgcccgaactcgacgacccgctg
gtcgagaaatgggaaaactattacgccagccgtcccgaatacctgaaccgcattatcgag
cgtggtggccgctatctgtatttcgtcgtcgatgacgtcgagcgccgcggcatgccgatg
gagttggcgctgctgccgatgatcgaatcggcctacaacccgaaagccgagtcatcggcc
aaggccgccggcatgtggcaattcatgccggccaccggtaaacaatacggactggaacgc
acctggtggtacgacggccgccgtgacgtggtcgccgcgaccgacgccgcactcgattac
ctcgacaagctgcacggccagttcaacgactggcaactggcactggcttcgtacaactgg
ggtgaaaacgcggtcgcccgcgcacagacgaaaagtgccgccgcaggcctgggcatgacg
tacagcgatctgcgcatgccgaacgagacgcgcaattacgtacccaagctgatggcggtg
cgcaacatcatcgccaatccggccgcatttggcgtcacgcttgccagcgtaccgaacaaa
ccttatttcgcagccgtcagcaccggccggcatatggacgtacaagtggcggccgatttg
tccgaaaccccggtgcaggagctgctgaagctcaatccgggcttcattcgcccggtgatt
gcctacaaggatgatcgcaagctggtgatcccggccgacaaggtcgctgccttccagcgc
aatctcgccaattacgacaagccactactcaactggcagccttacgtcaccaagcgcggc
gaatcgttcgcccagctcgcgtcgcagttcggtatcgacgtgagcgagctcaaggatatc
aacgatatcggcagcgacggcgccgcgcgtggtcagaccattctggtgccgaacgtgccg
ggactggatgtttccaaccggcagacgctggtcgcgctgcatgagaaccgtacggccgat
ccgatcgacaccggcgccagcgatgccccgcttgccgtcatcaaataccgcgtagcccgc
ggcgacacgctcttcaacattgccagccgctacgggatgaacgtggccgatttgcgcaag
ctgaaccagctcaaggccgacgatgtccgccttggcagtacgctcaaagtggccagcgtc
acccgcaccgccagcggcaagaaggcccccatccagcgtgaatacgtggtcaagaatggt
gacacgctggcatcgatcgccagaaaacaccgggttgacgccgacgatctgaaacgctgg
aatccgcagaaactctcaccgggcatccgtctggtcatctaccagccgccggcttga
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