Jeongeupia sp. HS-3: JHS3_20920
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Entry
JHS3_20920 CDS
T08604
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
jes
Jeongeupia sp. HS-3
Pathway
jes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHS3_20920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jes03019
]
JHS3_20920 (groL)
03110 Chaperones and folding catalysts [BR:
jes03110
]
JHS3_20920 (groL)
03029 Mitochondrial biogenesis [BR:
jes03029
]
JHS3_20920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jes04147
]
JHS3_20920 (groL)
Enzymes [BR:
jes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JHS3_20920 (groL)
Messenger RNA biogenesis [BR:
jes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JHS3_20920 (groL)
Chaperones and folding catalysts [BR:
jes03110
]
Heat shock proteins
HSP60 / Chaperonin
JHS3_20920 (groL)
Mitochondrial biogenesis [BR:
jes03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JHS3_20920 (groL)
Exosome [BR:
jes04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JHS3_20920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JHS3_20920 (groL)
Exosomal proteins of breast cancer cells
JHS3_20920 (groL)
Exosomal proteins of colorectal cancer cells
JHS3_20920 (groL)
Exosomal proteins of bladder cancer cells
JHS3_20920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCL76356
LinkDB
All DBs
Position
complement(2247683..2249320)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVKFGDSARAKMVNGVNILADAVKVTLGPKGRNVVLERSFGAPTITKDGVSVAKEI
ELKDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQGIVNEGLKYVAAGFNPTDLKRGI
DKAVIALVAELKKIAKPTTTSKEIAQVGSISANSDEVIGQKIAEAMDKVGKEGVITIEDG
TGLEDELDVVEGMQFDRGYLSPYFINNPEKQIALLENPYVLLFDKKISNIRDLLPVLEQV
AKSGRPLLIIAEDVDGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGATV
IAEEVGLSLEKATLEQLGQAKRIEVAKENTTIIDGAGSEEAIKARVATVRAQIEESSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARSNLGELKGLNADQDAGIKIVLKAIEAPLRQIVANAGDEPSVVVNRVVEGTGNFGYNA
ATGEYGDLVELGVLDPAKVTRSALQHAASIAGLLLTTDAMVAELPKDDAPAMPGGGMGGM
GGMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagaagtcaagtttggtgattccgcccgtgccaagatggtcaatggcgtc
aatatcctggccgatgcggtcaaggtgaccttgggccctaagggtcgtaacgtggtgctg
gagcgctcgttcggcgcgccgaccatcaccaaggacggcgtgtcggtcgccaaggaaatc
gaactgaaggacaagttcgaaaacatgggcgctcagttggttaaggaagtggcttccaag
accagcgatgtcgccggtgacggcaccaccacggcgaccgtgctggcgcagggcatcgtc
aacgaaggcctgaagtacgtggctgccggtttcaacccgaccgatctgaagcgcggcatc
gacaaggcggtgatcgccctcgtcgccgaactgaagaaaatcgccaagccgacgacgacc
agcaaggaaatcgctcaagtcgggtcgatctcggccaacagcgacgaagtcattggccag
aagatcgccgaagcgatggacaaggttggcaaggaaggcgtgatcaccatcgaggacggc
accggcctcgaagatgaactcgacgttgttgaaggcatgcagttcgaccgcggttatctg
tcgccgtacttcatcaacaatccggaaaagcaaatcgcgctgctggaaaatccgtacgtg
ctgctgttcgacaagaagatcagcaacatccgtgatctgctgccggtgctggagcaagtg
gccaagtcgggccgtccgctcttgatcatcgccgaagatgtcgatggcgaagcgctggct
accctggtggtcaacaacatccgtggcatcctcaagaccgtggccgtcaaggcaccgggc
tttggcgaccgtcgcaaggccatgctcgaagacatcgccatcctcaccggcgcgaccgtg
atcgccgaagaagtgggcctgtcgctggaaaaggcaacgctcgagcaactcggccaggcc
aagcgcatcgaagtggccaaagaaaacaccaccatcatcgatggcgccggttcggaagaa
gcgatcaaggcacgcgtggccaccgttcgtgcccagatcgaagaatcgagcagcgattac
gaccgtgaaaaactgcaagaacgcgtggccaagctggccggcggcgttgcggtgatcaag
gttggcgcagccaccgaagtcgaaatgaaggaaaagaaggcgcgcgttgaagatgctctg
cacgcaacccgcgctgccgtggaagaaggcatcgtggccggcggcggtgtggcgctgctg
cgtgcccgttccaacctcggcgaactgaagggcctcaacgccgatcaggacgctggtatc
aagatcgtgctgaaggcgatcgaagcgccgctgcgccagatcgttgccaacgcaggcgat
gagccgtcggtcgtggtgaaccgcgtcgttgaaggtacgggtaactttggttacaacgcc
gctaccggcgagtacggcgatctggtcgaactgggcgtgctcgatccggccaaggtcacc
cgctcggcactgcaacacgccgcatcgattgccggcctgctgctgaccaccgatgcgatg
gttgccgaactgccgaaggatgatgcaccggcaatgccgggcggcggcatgggcggcatg
ggtggcatggacttctaa
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