Jeongeupia sp. HS-3: JHS3_26220
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Entry
JHS3_26220 CDS
T08604
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
jes
Jeongeupia sp. HS-3
Pathway
jes00470
D-Amino acid metabolism
jes00550
Peptidoglycan biosynthesis
jes01100
Metabolic pathways
jes01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JHS3_26220 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JHS3_26220 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JHS3_26220 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jes01011
]
JHS3_26220 (ddl)
Enzymes [BR:
jes01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JHS3_26220 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
jes01011
]
Precursor biosynthesis
Amino acid ligase
JHS3_26220 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
RimK
ATP-grasp_3
CPSase_L_D2
GARS_A
FAXC_N
Motif
Other DBs
NCBI-ProteinID:
BCL76886
LinkDB
All DBs
Position
2820175..2821095
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AA seq
306 aa
AA seq
DB search
MAEMKQYGKVAVVMGGESSERDVSLMSGAGVLEALRSQGVDAHAFDPAEKPLEALIDEGF
DRAFLILHGGDGEDGTIQGALEYLGVPYTGCGVMASAIGMDKWRTKLMWQAVGLPVPAYL
LLDAQSDFDAVIPKLGSPVFVKPSNGGSSVGVAKCRSADEIRAAYLEAAKYDPLVMVEQA
VSGGEFSCAVLNGKALASVKIEPATEFYDYEAKYIRDDTVYTCPGLQGEAEQRARALAEV
AYRVLGATGWARIDFLTDEAGGIYLLEPNTAPGMTSHSLFPVCAREAGISYEQLVLQILD
TTLEAE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgaagcaatacggcaaggtcgccgtggtgatgggcggtgaatcgagcgag
cgcgacgtctcgctgatgagcggtgccggcgtacttgaagcgctgcgcagccagggcgtc
gacgcgcatgcgttcgatccggccgagaagccgctcgaggcgctgattgatgaaggcttc
gatcgcgctttcctgatcctgcacggtggtgacggcgaggacggcacgatccagggggcg
ctcgaataccttggcgtgccgtataccggttgcggcgtcatggcgtcggcaatcggcatg
gacaagtggcgcaccaagctgatgtggcaggccgtcggcctgccggtgccggcctatttg
ctgctcgatgcgcagagcgatttcgacgcggtgattcccaagctaggctcgccggtgttc
gtcaagccgtcgaacggcggttccagcgtcggtgtcgccaagtgccgcagtgcagacgag
atccgcgccgcctaccttgaggccgcgaagtacgacccgctggtgatggtcgagcaggcg
gtcagcggcggcgagttcagctgcgcggtgctcaacggcaaggcgctggccagcgtgaag
atcgaaccggcgaccgagttctacgactacgaagccaagtacatccgcgacgataccgtc
tacacctgcccgggcctgcaaggcgaagccgagcagcgcgcgcgcgcgctggccgaagtc
gcctatcgcgtgctcggcgcgaccggctgggcgcgcatcgacttcctgaccgatgaagcc
ggcggcatttacctgctcgaacccaataccgcgccgggcatgaccagccacagcctgttc
ccggtgtgcgcgcgcgaagccggcatcagctacgagcagctggtgctgcagatccttgat
acgacgctggaggctgaatga
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