Jeongeupia sp. HS-3: JHS3_31450
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Entry
JHS3_31450 CDS
T08604
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
jes
Jeongeupia sp. HS-3
Brite
KEGG Orthology (KO) [BR:
jes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jes03016
]
JHS3_31450
Enzymes [BR:
jes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JHS3_31450
Transfer RNA biogenesis [BR:
jes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JHS3_31450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BCL77409
UniProt:
A0A7I8EL42
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Position
3337916..3339769
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AA seq
617 aa
AA seq
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MHVFYDEDGGFKVATVKEAQAASFMIEDVRGKRGKIKAANVLLKFERPDPASLQSEAEAL
AADIDVDFLWEVCGADEFGFDDIAAEYFGAGPTPQQQAAVLIRISQAPMYFYKKGRGRYK
AAPEENVKAALAGLERKKREAEQMAAWQAELEAGALPEAFAPNLKRLIHRPDKNSLEYKA
LAAAADAQHTSVLRLLDHVGAIPDIEQYFLDSFEIEYFPKGRTGVTDANLAAPDDLRLAD
VEAFSIDDVTTTEIDDAFSIKKLANGNWQVGIHIAAPVLGIAPGSPLDEQVFERLSTVYF
PGDKITMLPDSAVDVFTLEAGSARPAVSMYLELNPGLDVVAHRSQVERVPMVANLRHDQI
ETHFNEDTAGKDGGDYPYRTELNFLWTLANALEARRGRAEDPNAPVRLDYSFYVDKLADG
TKKVRIQPRKRGSPMDKLVAEMMIFVNSTWGMDLHKAEIAAIYRVQGQGRVRMTTQFGPH
VGLGVECYAWSSSPLRRAVDFVNQTQIVSMIRETTPRFAKNDAELFGAIGSFDTAYAAYG
EFQDKMERYWCLRYLEQENLTELSATLIKENLVRIDGMPMVMRVPGLPELPAGSSVKLQR
LAIDFLELTVDCRLATI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttttttatgacgaggatggcggattcaaggtcgccacggtgaaagaggcgcag
gctgccagcttcatgatcgaagacgtgcgcggcaagcgcggcaagatcaaggcggccaac
gtgctgctcaagttcgagcgccccgatccggccagcttgcagagcgaagccgaggccctg
gctgcggatatcgacgtcgatttcctctgggaagtctgcggcgccgacgagttcggcttt
gacgatatcgccgccgagtactttggcgcgggcccgacgccgcagcagcaggccgcggta
ctgatccgcatctcgcaagcgccgatgtacttctacaagaagggccgtggccgctacaag
gccgcgcccgaagagaacgtcaaggcggcgctggccgggctggagcgcaagaagcgcgaa
gccgagcagatggccgcctggcaggccgagcttgaagccggcgcgctgccggaggcgttc
gcgcccaatctcaagcgcctgatccaccgtccggacaagaacagccttgaatacaaggcg
ctcgccgccgccgccgatgcgcagcacaccagcgtgctgcggctgctcgatcacgtcggc
gcgattcccgatatcgagcagtatttcctcgatagcttcgaaatcgaatacttccccaag
gggcgcaccggcgtcaccgacgccaacctcgccgcacccgacgatctgcggctcgccgat
gtcgaggcattctcgatcgacgacgtcaccacgaccgaaatcgacgacgccttcagcatc
aagaagctggccaacggcaactggcaggtcggcatccatatcgccgcgccggtgctgggt
atcgcgccgggcagcccgctcgatgagcaggtgttcgagcggctgtcgaccgtgtatttc
cccggcgacaagatcaccatgctgccggattcggcggtcgatgtgttcacgcttgaggcc
ggcagcgcccgcccggcggtgagcatgtatctggagctgaatccggggctggacgtggtg
gcgcatcgttcgcaggtcgaacgcgtgcccatggtcgccaatctgcgtcacgaccagatc
gaaacgcatttcaatgaagacaccgccggcaaggatggcggtgactatccgtacaggacc
gaactgaacttcctctggaccttggccaacgcgcttgaagcccgccgtggtcgcgccgaa
gacccgaacgcgccggtgcggctcgattacagcttctatgtcgacaagctcgccgatggc
acgaagaaggtgcgcatccagccacgcaagcgcggctcaccgatggacaagctcgtcgcc
gagatgatgatcttcgtcaacagcacctggggcatggatttgcacaaggccgagatcgcg
gcgatctaccgggtgcaagggcaggggcgtgtgcgcatgaccacgcagttcggcccgcac
gttggccttggtgttgaatgctacgcctggtcgagttcgccgctgcgccgcgcggtcgac
ttcgtcaaccagacgcagattgtctcgatgattcgcgagacgacgccgcgctttgccaag
aacgatgccgagctctttggcgcgatcggttccttcgataccgcctacgcggcgtatggt
gaattccaggacaagatggaacgttactggtgcctgcgctaccttgaacaggagaacctg
accgaattgagcgcgaccctgatcaaggagaacctcgtgcgcatcgatggcatgccaatg
gtcatgcgtgtgccgggtttgccggaattgccggccggttcatcggtcaaactgcaaagg
ctggcgatcgactttcttgaactcaccgtcgactgccgtctggcaaccatctga
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