Candidatus Jettenia sp.: L3J17_06765
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Entry
L3J17_06765 CDS
T07848
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3J17_06765 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_06765 (uvrA)
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3J17_06765 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3J17_06765 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
UvrA_DNA-bind
SMC_N
AAA_21
AAA_16
AAA_29
nSTAND1
AAA_18
ATPase
nSTAND3
DnaJ_CXXCXGXG
NACHT
AAA_28
SLFN-g3_helicase
AAA_23
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UJS18749
LinkDB
All DBs
Position
1541460..1544330
Genome browser
AA seq
956 aa
AA seq
DB search
MKKSIIARGIRVHNLKNITVEIPHKKLVVITGVSGSGKSSLAFDTLFAEGQRRYVESFSA
YARQFLEKMDKPDVDHIEGIPPAIAIQQKNPVKNRRSTVGTATEINDYLRLLFARIGKTF
CSSCNRQVQIDSVSHIVETILSLPEDTRFLVTFPIVMSQKVSSQAHINLLKERGLVRILA
DNTILDITSEKNDWDIRSAKFVYGIIDRLVVKDVSKERLVDALETAYRLGAGHASIIYNS
PDSSLCNDPHIQGQPLNIQGSSWRELKYSKQFFCSYCAIEYPDPVPMLFSFNNPIGACPK
CQGFGHTIDINLDAVIPDKEKTLNQGAIAPWKTPTYNSMFESLKKASAKYNIPLTVPFRK
LTKEQVKLILEGTEDFCGIYDFFHWLEQRKYKMHIRVFLSKYRGYTLCHTCNGKRLKNQA
LHVLINNKNISDICNMTIEEAYQFFKELQLTDYETNIAHLLLQEIKKRLDYMIKVGLEYL
TLDRMTRTLSGGEAQRVNLTTSLGSSLVNTLYILDEPSIGLHPRDTDRLIQILKRLQSIG
NTVVVVEHEKEVIKAADEIIDIGPGAGENGGMLVYQGAFKDLPAHNISLTGQYLKGAKEI
KIPRNRKKSSKKAIVLRGASQNNLKGIDVTFPLNMLVCVTGVSGSGKSTLVQDTLYGAIK
EKKKGCAGLIGKYKGIEGTQLITDVVLVDQSPIGRTPRSNPVTYIKIFDEIRRLFSSTRD
AKIRKLEIGSFSFNVAGGRCEQCEGAGYIIVDMQFLADITITCDKCNGKRFNKKVLDVKY
KDKNIHEVLEMTVDEALIFFHDSTRITKGLKFLQDTGLGYLRLGQPATTLSGGEAQRLKI
SSYIAQENTDVMLFIFDEPTIGLHMDDIQKLLTCFQKLLEAGHSLIVVEHNLDIIKSADY
LIDLGPEGGNAGGYIVGCGTPEQISQIQSSYTGRYLKPYFSQTSNAGRGKRSVISK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccattattgcccgtggcatacgggtgcataatctcaagaatattaccgtt
gaaatcccgcataaaaagcttgtggtgattacaggagtcagtggatcgggcaaatcaagc
ctggcatttgataccctttttgcagaggggcaaaggcgatatgtagagtctttttcagct
tatgcgcgtcaattcctggaaaaaatggataaaccggatgtagatcacattgaaggaatc
ccgcctgcaatagccattcagcaaaaaaatccggtaaaaaaccgccgctcaaccgttggg
actgctacagagattaatgactatctgagactactgtttgcccggattggcaagaccttt
tgtagtagctgtaaccgacaggtacagatagactctgtctctcatattgtggaaaccatc
ttatcattgccggaagatacacgattcctcgttacattcccaatcgttatgagtcaaaaa
gtttcaagtcaggcacacattaacctgctgaaagagcgcgggttggtaagaatcctggcc
gataatactattcttgacatcacctcagaaaaaaacgattgggatatcaggtctgcaaaa
tttgtttatggaattattgaccggctggtcgttaaagacgttagtaaagaacgccttgta
gatgctctggaaactgcataccgcctgggtgcgggacatgcaagcattatctacaatagt
cctgattcttctctttgtaatgatccgcatatacaaggccagcctctcaatattcaggga
tcctcctggagagaactcaaatacagcaagcaattcttttgcagttattgtgctattgaa
tatcctgatcccgtacctatgctattttcgtttaacaacccgattggcgcctgtcctaaa
tgtcagggttttggacatactatcgatatcaacctggatgccgtcataccggataaagaa
aaaacgttgaatcagggagctatcgctccctggaaaacacctacctacaactcgatgttt
gaatcgcttaaaaaggcatctgcaaaatataatataccactcactgtccccttccgtaaa
ttaacgaaggagcaggtaaaattaatcctggaaggcacagaagatttctgtggcatctac
gacttctttcactggttagaacagcgaaaatataagatgcacatccgcgtattcctgagt
aaataccggggatataccctttgtcatacctgcaatggaaaacgcttgaaaaatcaggca
ttacatgttctgattaacaataagaatatatcggatatctgcaacatgacaatcgaagaa
gcttaccaattctttaaagaacttcagcttaccgattatgaaacaaatatagctcacttg
cttttacaggaaattaaaaagcgattagactacatgatcaaggtaggattagaatatctg
accctggatcgtatgactcgtaccctttccggaggagaagcacaaagggtaaaccttaca
acatctctgggttcttcactggtaaatactctctatatcctggatgaaccgagtattggg
cttcatccgagagataccgacaggctcatacagatcctgaaacgattacagagtattgga
aacaccgttgtcgtcgttgaacatgaaaaagaggtcattaaggcagcggatgagattatc
gatattggaccgggggcaggagaaaatggcggcatgcttgtttatcaaggtgcatttaaa
gatttgcctgctcataatatttcactgacgggacaatatttaaaaggtgctaaagagatt
aaaatacctcggaatcggaaaaaaagttccaagaaggccattgtattgagaggcgcttca
caaaataatttgaaaggaatagatgttacctttcctcttaatatgctcgtatgtgtaacg
ggggtatccggatcagggaaaagcacccttgtacaagataccctttacggggcaataaaa
gaaaagaaaaaagggtgcgcaggactcataggaaaatacaagggaatcgaaggcacacaa
ttaattactgatgttgtccttgtagatcaatcacccataggccgaacccctcgttctaat
cctgttacatacataaagatatttgatgaaatccgaaggctcttttcatcaacccgggat
gcaaaaatacgaaaactggaaatcggctctttttctttcaatgtggctggcggaagatgc
gaacaatgcgagggcgccggctatatcatagtcgatatgcagttccttgcagacattaca
attacctgcgataaatgtaacgggaaacgatttaataaaaaggtgcttgatgtaaaatat
aaagacaaaaacatccatgaggtattagaaatgacggtagatgaagcccttatattcttc
catgattcaacacgaattaccaaaggattaaaatttcttcaggatacgggattgggctac
ctgcggttaggccaacctgcaacaaccttatccggaggggaggcacaaagactcaaaatt
tcatcctacatagctcaggaaaacaccgacgtgatgctctttatctttgatgaacctacg
ataggactccacatggatgatattcaaaaattactcacgtgttttcagaaattacttgag
gccggacactctttaatcgtggtggaacataatctggatattattaaatctgctgattat
cttatcgatctcggccccgaaggtggcaatgcgggcggatatatcgttggatgtggcacg
ccggaacaaatttctcaaatacaatcaagttataccggcaggtatttgaagccttatttt
tctcaaacatcaaacgcaggcaggggcaaacggagcgttatttcaaaatga
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