Candidatus Jettenia sp.: L3J17_07605
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Entry
L3J17_07605 CDS
T07848
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
jet
Candidatus Jettenia sp.
Pathway
jet02020
Two-component system
jet02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L3J17_07605 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3J17_07605 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jet03021
]
L3J17_07605 (rpoN)
Transcription machinery [BR:
jet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3J17_07605 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_Crp_2
Sigma70_r4_2
HTH_23
MarR
Motif
Other DBs
NCBI-ProteinID:
UJS18907
LinkDB
All DBs
Position
1752771..1754201
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AA seq
476 aa
AA seq
DB search
MKMQSSLLPQLQQKMKLSPQIIQSIEILQLPLLALVEHVQQELVDNPVLEEVLEEKKDEN
LKEGDETPADDAKSDEFDKLGEMADDWRDYYSQTIVRRNNLSEERDQKQEALENTAAKPM
SLHDYLMGQLSLIDFPSHLAEAAENIIYSIDKSGYLASPLEEIVQSLEKPLPVEEVKEAL
KVVQSLEPPGVGARNLQECLVLQLDKRDSHYQLTKELLLNYLEDIEMKKYPAIAKKTGQS
LDIIKRQVEFIRTLNPKPGSLFCDETIPYVVPEVKVEYIDGKYEVFLIDNTNLPHLHISS
FYKKFLSENGTDNSTLQYIQKKIESAKWLIDAIEQRRSTLYKVACKIVEMQKDFLDGGIH
RLHTLKMQDIADVVGVHVSTVSRAIAHKYIQTPQGIFEMKFFFTGGFQNVDGSMESWEAI
RQKLSEIVAKENKSNPLSDEEVAEKLHASGIAIARRTVTKYRRIMKIPSSRQRKEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcaatcgtctttattacctcaacttcagcaaaaaatgaagttgtctcctcaa
attatccaatcaattgagattttacagttacctttattggctcttgttgaacatgtacag
caagagttagtagacaatcctgtacttgaagaggtacttgaagagaaaaaagatgagaac
ctcaaggaaggagatgaaacaccggccgatgatgcgaaaagtgacgaatttgataaactc
ggtgaaatggctgatgattggcgtgattattactcccaaactatagttcggagaaataac
ctctcggaagaacgcgatcagaaacaggaggcattagagaacaccgcagccaagccaatg
tctctccatgattatttgatggggcagctctcattaatcgatttccccagccatcttgca
gaagccgctgaaaacattatctattccattgataaatccggatatttagccagtcctctg
gaagaaattgtgcaatcccttgaaaagccgcttcccgttgaagaggttaaggaagcctta
aaagttgtacaatcgcttgaaccacccggagttggagccagaaatttgcaggagtgtctc
gtattacaattggataaacgagattcacattaccagttaacgaaggaattgcttcttaat
tatctggaagatattgagatgaaaaaatatcctgccatagcaaaaaaaaccggacagagt
ttagacatcataaaaagacaggttgaatttatccgtaccctaaatcccaaacctggttct
ctcttttgtgatgaaactattccgtatgtagttccggaagtaaaagtagagtatattgac
gggaaatatgaggtatttcttatcgataacacgaatttgccccatttacatatcagttct
ttttataagaaattcttaagtgaaaatggcacggataattctaccttgcaatatatacaa
aagaaaattgaatcggcaaaatggcttattgatgcaatcgaacagagacggagcacgcta
tacaaagtagcctgcaaaatagtagagatgcaaaaggattttttagatgggggaatccac
cggttgcataccctgaaaatgcaggatatcgccgatgttgtaggagtacatgtatcaacg
gtaagccgcgccattgctcataaatatattcaaacaccccaaggtatattcgaaatgaag
tttttctttaccggaggttttcagaacgtggacggatcgatggaatcatgggaagctata
cggcaaaaactctccgagattgttgcgaaagaaaataaatcaaatcctttgagtgacgaa
gaagtcgcagaaaaactccatgcctctggtatagctatcgcccgaagaaccgttacaaaa
taccggagaatcatgaagataccatcatcaagacaacggaaggaatattag
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