Candidatus Jettenia sp.: L3J17_08115
Help
Entry
L3J17_08115 CDS
T07848
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
jet
Candidatus Jettenia sp.
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
IMS
IstB_IS21
HTH_30
AAA_2
AAA_16
HTH_3
VpsR
Nup54_a-b
HTH_50
nSTAND3
RasGEF_N_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UJS19004
LinkDB
All DBs
Position
complement(1881639..1883027)
Genome browser
AA seq
462 aa
AA seq
DB search
MGSKVLIIDDEKLMRISLESQLRKEGYNVKSVDNALDGLKIVKSEEYDVVVTDLRLSGMG
GIELLKDIKKYNQEIIVVIMTAYGTLESAVSAIKEGAYDYIAKPFSTDELIIKLQRALHY
KNTTAEVNRLRKEIQAEFEFSNIIGNSEAMKKVIETVKSVSERDTTVLIKGESGTGKEKI
AGAIHYHSNRRMGPFIRVSCAALNREILESELFGHEKGAFTGAVKTRRGRFELANSGSIF
LDDIDDVPLDMQVKLLRVLQERTFERVGGEETLCVDVRVICATKKDLLEHIKEGYFREDL
FYRLNVVPVNIPPLRQRKEDIPHLINYFLKKFVSQYEDALPSVSKEALDVLLAYDWPGNV
RELENVIEHAIAFSKLKGISLETLPEYLRKLDVRTDLLSMNLSNKETINLQDALTEVEKK
LIQWARQKANGNQVKMAEILGIPRTTLRNRLMKLQLFENVIP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtaaagtattaataatcgacgatgaaaaactgatgaggatatctttagaaagt
caattaaggaaggagggttataatgtaaaatcagtagataatgctttagatgggttaaaa
atagtaaaatctgaggaatatgatgtggtagtaactgacctaagattgtcaggtatgggt
ggaattgaacttttaaaagatattaaaaaatataatcaagaaattattgttgttattatg
acagcttacggtactcttgaaagcgctgtatctgcaattaaagaaggagcatatgattat
atcgcaaaaccattttctacagacgaattgattattaaacttcaaagagcacttcattat
aagaatacaactgctgaagtcaatcgcttaagaaaggaaatacaagctgaatttgagttt
tctaatattattggtaacagtgaagctatgaaaaaggtaatcgagactgtcaaaagtgtt
tcagagagagacaccactgttcttataaaaggagagagtggaactggaaaagaaaaaata
gcaggcgctatccactaccatagtaatagaagaatggggccgtttatcagggtgagttgt
gccgcattaaatagagaaatattggaaagtgaactttttggacatgaaaagggtgctttt
accggcgctgttaagacaagacgaggaagatttgaattggcaaacagcggctcaattttt
ttggatgatattgatgatgttccattggatatgcaggtcaagttattacgggtacttcaa
gaaagaacatttgaaagagttggaggagaggaaaccctttgtgtagatgtaagggtaatc
tgtgcaacaaagaaagatcttttggaacacataaaagaagggtacttcagagaagattta
ttttatagattgaatgtggtgcccgttaatattccaccacttcgccaaaggaaagaggat
attccgcatttaatcaattatttcttgaagaagtttgtatctcaatacgaggatgcttta
ccaagtgtttcaaaagaggcattggatgtattgttggcttatgactggcctggaaatgtc
agggaacttgaaaatgttattgaacatgctatcgcattctctaagttaaaaggtatttca
ttagaaacacttccagagtatttaaggaaacttgatgtacgaacagatctattatcaatg
aatttgtctaataaagagacaataaatttgcaagatgcacttacggaagttgagaaaaaa
cttatacaatgggcacgccaaaaagcaaacggtaatcaagtaaaaatggcagagatattg
ggtattccacgaacaacacttcgtaacagattgatgaaattgcagttattcgaaaatgtg
ataccatga
DBGET
integrated database retrieval system
