Candidatus Jettenia sp.: L3J17_08800
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Entry
L3J17_08800 CDS
T07848
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
jet
Candidatus Jettenia sp.
Pathway
jet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
L3J17_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jet03019
]
L3J17_08800
03009 Ribosome biogenesis [BR:
jet03009
]
L3J17_08800
04131 Membrane trafficking [BR:
jet04131
]
L3J17_08800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jet04147
]
L3J17_08800
Messenger RNA biogenesis [BR:
jet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
L3J17_08800
Ribosome biogenesis [BR:
jet03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
L3J17_08800
Membrane trafficking [BR:
jet04131
]
SNARE
SNARE associated proteins
Others
L3J17_08800
Autophagy
Aggrephagy
Other aggrephagy associated proteins
L3J17_08800
Exosome [BR:
jet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L3J17_08800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_2
AAA_22
AAA_5
TIP49
AAA_14
AAA_lid_PRS2_C
AAA_33
nSTAND3
IstB_IS21
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_28
AAA_18
AAA_7
Zeta_toxin
Sigma54_activat
AAA_17
Parvo_NS1
ATPase_2
AAA_24
NB-ARC
TsaE
SKI
ABC_tran
AAA_19
DUF815
AAA_3
SLFN-g3_helicase
bpMoxR
PhoH
ORC-CDC6-like
TniB
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
UJS16020
LinkDB
All DBs
Position
complement(2034673..2036793)
Genome browser
AA seq
706 aa
AA seq
DB search
MKDNSEISLKVAEAVRKDVGRGLARIDPADIEKLHATVGDIVEIVGKRSTVAKIMPAFKE
ERGMSKIQIDGLTRGNAQISLDEKILVRKISWNPANNVVLVPVNATNLDRDSKYIGSLLD
GLPVIAGDRIRATLFGSRFSDFIVESTTPKGIVIINPTTILKIDEKKSGSGDRIKFSYED
IGGLSHEIQRIREMIELPLKHPEVFERLGIDAPKGVLLYGPPGCGKTLIARAVANETEAY
FITINGPEIIHKFYGESEARLREIFEDAKKHAPSIIFLDEIDAIAPKREHVVGDVEKRVV
AQLLALMDGLDSRGHVIVIAATNIPGALDPALRRPGRFDREISIPIPDKKARFSILEIHS
RGMPLSEDVSLDKLAEITHGFVGADLQSLCREAAMLCLRKVIPEIDFDASNIPYETLMNM
KVCMEHFIDALKEVEPSALREVFVEIPDVGWDDVGGLETIKQQIREAVEWPLKYTDLFTY
AKISSPKGILLYGPPGTGKTLIAKAVANETKVNFISIKGPALISKYVGESERGIRDIFKK
AKQAAPCIIFFDELDVIVPKRGEGGDSHVTERVIGQFLTEMDGIEELKGVLVLAATNRME
QIDPALLRAGRFDYLIEIPIPDAETRLKIFQVHTQDKPIEKGIDLKKYAWETEDMTGADI
ELICKRAVLMAIRNAIAQHKESNEGFIITAGDFDNAVKEVKQRVSL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaatagtgaaatatctttaaaggttgcggaagcagtaagaaaagatgtggga
agagggttagcgcgaatcgatcccgctgatattgaaaagttgcatgctacggttggagat
attgtagaaatcgtaggtaagagaagtaccgtcgcaaagataatgcctgcttttaaagaa
gagagaggaatgagtaagatccaaatcgacggtttaacccgtggcaatgcccagataagt
ttagatgagaagattctggtaaggaagatatcgtggaatcctgcaaacaatgttgttctc
gttcctgtgaatgcaacgaatctcgatcgggatagtaagtatataggaagtttactcgat
gggcttcctgttattgcgggtgaccggatccgtgccacactctttggcagtcggttttcc
gattttatcgttgaaagcacaactccgaaagggattgtaattatcaatcccacgacaata
ttaaaaatcgatgagaagaaatcgggatcgggtgatcgcatcaaattctcgtatgaggat
ataggcggccttagtcatgaaatacaacgaatacgggagatgattgaacttccattaaaa
catcccgaggtgttcgagcgtttagggattgatgcccccaagggtgtattgctctatggt
cctccaggatgtggaaaaacgcttattgcccgtgcggtagccaatgagactgaagcatat
ttcattaccattaatggccctgaaattattcataaattttatggggaaagcgaggcacgg
cttcgggagatcttcgaggatgcaaaaaagcacgcaccgagcattatttttctcgatgag
attgatgctatagcgccgaaacgagaacatgtggtaggggatgttgaaaaaagggtggta
gctcaactcctggcccttatggatggactcgacagccgtggtcacgttattgtcattgcc
gctaccaatattccaggtgctttggatccggcgttgagacggccaggacgttttgaccgg
gaaatttccattcctattcctgataagaaagcacgattttcaatcctcgagatacacagc
cggggcatgccattgtctgaagatgtgagtctcgataagcttgctgaaattactcacggt
tttgtaggggcagatcttcaatcgctctgtcgggaagctgcaatgctctgtttaagaaag
gttattccggaaattgattttgatgcatccaatataccttatgagaccctgatgaatatg
aaagtatgtatggaacattttatcgatgcgctgaaagaagtagagccttccgccttgcgc
gaagtgtttgtagagattccggatgtaggatgggacgatgtcggaggacttgagacaata
aaacaacagattcgggaggctgtagaatggccgttgaaatataccgatttatttacctat
gcaaagattagttcacccaaggggatattgctttacggccctccgggaacgggaaagacg
ctcatagctaaggccgtagccaatgaaacaaaggttaattttatatcgatcaaagggcct
gccctcatttcgaaatacgttggcgaatcggaacgaggtatcagggatatatttaagaag
gcgaaacaggcagctccgtgcattatcttcttcgatgagttagatgttattgttccgaaa
cgtggagaaggaggtgattcgcatgtgacagaacgtgtcattggtcaatttcttacagaa
atggatggtattgaagagttgaagggagttctggtgcttgcagctacaaatcgtatggag
cagatagacccggctctgcttcgtgcaggacgattcgattatcttattgaaattcccatc
cccgacgcagagacccgtttaaaaatatttcaggtgcatacccaggataaaccgatagaa
aaagggatagatctgaaaaaatatgcatgggaaaccgaagatatgacaggtgcggatata
gaattgatttgcaagcgagctgtattaatggctattcggaatgctattgctcaacataag
gaaagcaatgagggatttataataacagcaggtgattttgataatgcggtgaaagaggtg
aagcaaagagtgagtctgtag
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