Candidatus Jettenia sp.: L3J17_09645
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Entry
L3J17_09645 CDS
T07848
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03030
DNA replication
jet03430
Mismatch repair
jet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3J17_09645
03430 Mismatch repair
L3J17_09645
03440 Homologous recombination
L3J17_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jet03032
]
L3J17_09645
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_09645
Enzymes [BR:
jet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3J17_09645
DNA replication proteins [BR:
jet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3J17_09645
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3J17_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
UJS16182
LinkDB
All DBs
Position
2241294..2244749
Genome browser
AA seq
1151 aa
AA seq
DB search
MSKDTFIHLHVHSEYSLLDGACKISDLVDKAAQLKMSALALTDHGNMFGAIEFYETAKSR
GIKPILGYEAYVAKGSRLDKESRNGKESLSHITLLAENYEGYRNLLKLTTSAYLEGFYYK
PRIDKTLLRTLSKGIICLSGCMTSEINHCLLNNRYEEAIMVAREYQDIFGPDHFYLEVQN
NKIEQQAGLVSKAIEIGKELGIPLVATNDIHYMNADDAMAHDVLLCINTGKHLSDVQRLR
FGTSEFYFKNPGEMYDIFQHLPEAVENTLKIADRCNVEMPFGKMHLPKFISPQGMANNAY
LRKLCEEGAIQKYGSLTQQVRERLDYELQVIETTGFVDYFLIVWDFIYFAVQHRIPATGR
GSGAGSLVAYLLNITNIDPLENDLLFERFLNAERISMPDLDIDFCAEGREKVIQYVRKKY
GGDSNVAQIITFGTMKAKAVIRDVGRVMNIPLSEVDKVAKLIPNTINITLKQALEQEPAL
KTLYEGEKHIRELFDISKKLEGLCRHASVHAAGIVISDEPLTEYVPLAKSGDVVTTQFYD
EILVDKIGLLKADFLGVRKLTVIDKAIKLIHETTGKDIDLMKIPMDDKQTYELLARGDVK
GIFQVETSRGFRELLKKLKPDKFADILPLVALYRPGPLQSGMVESFINRKHGREEVTYLH
SSLEPLLKETHGVILYQEQVMRIANRLAGFSLNQADNLRKAMGKKKPEIMAKFKDQFVNG
ATAHGIPEKTARSIFELMEYFAGYGFNKSHSAAYAVITYQTAYLKANYPVQYMIAQLSCE
KENTDKIVEYIEDCRRMGIEVLPPDVNESQNDFTISDGNKIRFGLGAIKNVGDKAIESIV
LSRNKGGRFTSILDVCKRVDMRVVNKQVIESMIKSGCFDSLHDNRARLLAGLDTTMQMGS
VANKDRRTGQKSLFAIDTDMDMFGKGDPGKDSDTSQWSEKELRQAEKESLGFYLSSHPLH
AYHEKIKQLSTTSSAEVSELSEGDEVIIGGIITNLRQSTTKRGDPMLYITLEDTKGIVEC
IAFHKETKTYKPLFNMDEVVFVKGQVGFQSTVPTVRIKEVIAEKDAFTRLVTCVAIRFDV
SHFEETKFLQLKEIIKLHSGTCPLFFDIITTQGTYQIKTSRQYFISATDAFVSHIQELFG
SDALLINQTEY
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagatacttttatacaccttcatgtccatagtgaatacagcctccttgacggc
gcttgcaagataagtgatcttgtagataaagccgcccagcttaaaatgtctgcccttgcc
cttacagaccacgggaatatgtttggcgctatagaattttatgaaacagcaaagtcacgg
ggaataaaacccatcctgggttatgaagcatatgtagcaaaaggaagtcgtctggataag
gagtcgagaaatgggaaagaatctcttagccatatcactctccttgctgagaattacgag
ggttaccgcaatcttttaaaactcacaacctcggcatacctggaaggtttttactataaa
ccacggattgacaagacactcctgagaaccctttccaaaggaattatttgcctgagtgga
tgtatgacttcagaaatcaatcattgcttattaaacaaccgttatgaagaagcaataatg
gtagcaagagaataccaggacatctttggtcctgatcatttttatctggaggttcaaaac
aacaagattgagcaacaagcgggattggtgtcaaaagcgatcgaaatagggaaggaattg
ggtatacccctggtggcaacaaatgatattcattacatgaatgcagacgatgcgatggcc
catgatgttctcttatgcattaataccggaaaacatctgtcagatgtacaaagactgcgc
tttggaacaagtgaattttactttaaaaatcccggtgaaatgtacgacatctttcagcat
ctgccggaagccgttgaaaacactctaaaaattgccgaccggtgcaatgtggaaatgccc
tttggaaagatgcatctgccaaagttcatttcaccacagggtatggccaacaatgcctat
ctcaggaagctttgtgaggagggcgcaatccaaaaatacggttctcttacgcaacaggtt
cgtgagcggctggattacgagctgcaggttatcgaaactaccggttttgtggattatttt
ttaatcgtttgggactttatttattttgccgtacaacatcgcatacctgctacgggacga
ggttccggtgcaggcagtctggtcgcttatttattgaatattaccaatatcgatcctctc
gaaaacgacttgctctttgagcggtttcttaatgcagaaagaatttccatgcctgatctc
gatattgacttctgtgcggaaggtcgcgaaaaggttatccagtatgtaaggaaaaaatac
ggcggggatagcaatgtagctcaaatcattacctttggaacaatgaaggcaaaggccgtt
attcgcgatgtaggccgggtaatgaatatccctttgtcggaagtagataaagtggctaaa
cttattcccaatacaatcaatataactttaaaacaagccctggagcaggaacctgcatta
aagacactctatgaaggcgaaaaacatatccgtgaactgttcgacatttctaaaaagctg
gaaggattatgccgccatgcatcagtacatgcagcaggtattgtaatctcagatgaacca
ctcaccgaatatgtacctctggcaaaaagcggagacgttgttacaacgcaattctatgat
gaaatattggtagataaaattggtttgttaaaggccgattttcttggcgttcggaaatta
accgtcatcgataaggctataaaattaattcatgaaactaccgggaaagatatcgatctt
atgaaaattcctatggacgataagcaaacgtatgaattattagcccgtggggatgtaaaa
gggattttccaggtagaaaccagccgcggattcagggaattgttaaaaaagctaaaacct
gataaatttgctgacattttacctctcgtagccttgtacagaccaggtccattgcagagt
gggatggtagaatcttttattaaccggaaacatggaagagaagaggtaacgtatcttcac
tcttcactggaacctctcctgaaagagacccacggagtaattttataccaggaacaggtt
atgcgtattgccaaccgcctggccggtttttctctcaaccaggctgacaatctccgtaaa
gcgatgggaaaaaagaaacctgaaattatggcaaaattcaaagaccagttcgtaaacgga
gctaccgcacatgggattcctgaaaaaactgcaagaagtatctttgaactgatggaatat
ttcgcaggatatggcttcaataaatcccattccgcagcatatgcggtaatcacttatcaa
actgcctatttaaaggcaaactaccctgttcagtatatgattgcacaattgagttgtgaa
aaagaaaatacggataagattgtagagtatattgaggattgccgccggatgggtatcgag
gtattgcctcctgatgtcaacgagagtcaaaatgattttactatctcagatggaaataag
atacggttcggactgggagctatcaaaaatgtaggggataaagccatcgaatcaatcgtc
ctgtccagaaataaaggaggacgatttacctcaatcctggatgtatgcaaacgggttgat
atgcgagtcgttaataagcaggtaattgaatcgatgatcaaatcagggtgtttcgactcg
ttgcatgataatcgcgcgcggctgcttgcagggcttgatacaactatgcagatgggaagc
gtagcaaacaaagataggcgtaccggtcaaaaatccttgtttgctatcgacaccgatatg
gatatgtttgggaaaggcgacccgggaaaagacagcgatacgagtcagtggtcagaaaag
gaactgcggcaagcagaaaaggagagtcttggcttctacctgagttcccatcccctgcat
gcctatcatgaaaaaatcaagcaattatccaccacgtcatctgcagaggtatcggaactt
tctgagggagatgaagtaattatagggggtattattacaaatcttaggcaaagcactaca
aaacgaggcgaccccatgctctatattaccctcgaagatacgaaaggcatagttgagtgt
attgcctttcacaaagaaacaaagacgtataagccactattcaacatggatgaggttgtt
tttgtgaaaggccaggtcggcttccaaagtactgtccccaccgtacggataaaggaagtt
attgccgaaaaagatgcattcacacgcctcgttacatgcgtagccattcgctttgatgtc
tctcattttgaagagacaaaattcctgcaattaaaagaaattattaagctccatagcggt
acatgtcccctgttttttgatatcattaccactcaaggtacttatcaaatcaagacatcc
cgtcaatatttcatctcagcaacagatgccttcgtatcgcatatacaagaactcttcggt
tcggatgcacttctgataaatcagacggaatactaa
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