Candidatus Jettenia sp.: L3J17_10210
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Entry
L3J17_10210 CDS
T07848
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03420
Nucleotide excision repair
jet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3J17_10210
03430 Mismatch repair
L3J17_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_10210
Enzymes [BR:
jet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3J17_10210
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3J17_10210
MMR (mismatch excision repair)
Other MMR factors
L3J17_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_11
UvrD_C_2
AAA_30
ResIII
DEAD
DUF3726
Motif
Other DBs
NCBI-ProteinID:
UJS16288
LinkDB
All DBs
Position
2358504..2360297
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AA seq
597 aa
AA seq
DB search
MFLLKDITENQREAVTHMEGPLLIIAGAGSGKTRVITRRIGYLVSQGINPYNILAITFTN
KAADEMCERIKQFLSQKGLWISTFHKMCSRILRNNIERLGYSKDFSIYDTTDQLNQIKSI
MAELQFDTAQWKPRTIASTISHAKNKLINPETFASTASGYYNRIVAQVYTKYHAVLKTNN
ALDFDDLLIKTIELFKTHTDILEMYQEKFKFVLVDEYQDTNYTQYTITRMLASKYRNICV
TGDPDQSIYGWRGADIRNIMDFEKDYPDAKVVLLEKNYRSTKRILHAASSVIQQNRYRKQ
KKLWTENVEGEKIKVIHCEDEHGEAEEIAKSIRMLNTKGVKYSDIALFYRTNAQSRVLEI
SLRNHGIPYRIIGGVEFYQRKEIKDVLSYLRLCINPQDRIALERTINTPTRGIGNTTIKK
LEDWATAQNTSLFNALQQVSLIPEIKGQGTLSIKKFTELILHLQQLPKSPVENIIKQVIQ
ETRYIEFLRESGEKESKDRIANAEELVNAAYEYDMNYSEGTLQGFLEEVALVSDVDELQE
DTRAVTLMTFHTAKGLEFPVVFITGMEEKLLPHAESTDSDDKIEEERRLCYVGITRQ
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttctattaaaagatattactgaaaatcagcgtgaagctgttactcatatggaaggc
cctctcctcatcatagcgggagccggtagcggcaaaacccgtgtaattacacgtcgcatt
ggttacctggtatcacagggtataaatccatataacatattagccatcaccttcacaaat
aaagcagccgatgaaatgtgtgaacgcataaaacaattcctatcacaaaaaggactgtgg
atatccaccttccacaaaatgtgttcacggatactcagaaataatatcgaaagactggga
tactcaaaagactttagtatctacgataccactgatcaactgaaccaaattaaatccatt
atggcagaactccagtttgacactgctcaatggaaacctcgtacgatagcaagcactatc
agccacgctaaaaataaactcataaatcctgaaacctttgcgtctaccgcatcaggatat
tataatcgtattgtcgctcaagtttatacaaaataccatgcagtcctcaagactaacaat
gcccttgattttgatgatctactcatcaaaactatagaactatttaagacacataccgat
attttagagatgtaccaggaaaaatttaagttcgttctcgttgacgaataccaggatact
aattacactcagtataccatcacacgaatgcttgccagtaaatacagaaacatctgtgta
acaggcgaccctgatcagtccatctatggatggcgtggagcggacatcagaaatattatg
gattttgaaaaagattatccagacgctaaagtcgtgctgctagagaaaaactatcgttct
acaaagcgtattcttcatgcagcctccagcgtaatccagcaaaacagatacagaaaacaa
aagaaactttggacagagaatgtagagggtgaaaaaatcaaggtaatccattgtgaggat
gaacacggagaagcggaagaaattgcaaagtcaattagaatgcttaatacaaaaggggta
aagtactcggatattgcattattctatcgtaccaacgctcaatctcgagttcttgaaata
tctttaagaaatcacgggatcccgtataggatcattggtggtgtagaattttatcaaaga
aaagagattaaagatgtattgtcttatctcagactctgtattaaccctcaggatagaata
gcactggaacgcacgatcaatacacccacacgaggtataggaaataccaccataaaaaaa
ctggaagactgggcaacagcacaaaacaccagcctcttcaatgccttacagcaagtcagt
ttaataccagaaattaaagggcaaggtactttatccataaaaaaattcaccgaactcatt
ttacatctgcaacaattaccaaagtcacctgtggaaaatatcattaaacaggtcattcaa
gagacaagatatatagagtttctgagagaatctggagaaaaagaatcaaaagaccgtatt
gcgaacgcggaagaacttgttaatgctgcttacgaatatgacatgaactattctgaaggt
accttacaaggatttttagaagaagtagccctggtttctgatgtcgatgaactacaagaa
gatacccgggcagtgacccttatgacattccataccgctaaaggattggaatttcccgtt
gtttttattaccggtatggaagaaaagttattgccacacgcggaatctacggattcagat
gataagatcgaagaagaacgaaggctctgttatgtaggaattacccggcaatga
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