Candidatus Jettenia sp.: L3J17_13095
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Entry
L3J17_13095 CDS
T07848
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03030
DNA replication
jet03410
Base excision repair
jet03420
Nucleotide excision repair
jet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3J17_13095 (polA)
03410 Base excision repair
L3J17_13095 (polA)
03420 Nucleotide excision repair
L3J17_13095 (polA)
03440 Homologous recombination
L3J17_13095 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jet03032
]
L3J17_13095 (polA)
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_13095 (polA)
Enzymes [BR:
jet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3J17_13095 (polA)
DNA replication proteins [BR:
jet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L3J17_13095 (polA)
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L3J17_13095 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3J17_13095 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UJS16835
LinkDB
All DBs
Position
complement(3056942..3059608)
Genome browser
AA seq
888 aa
AA seq
DB search
MPERFFIIDGHSHCYQAYYAITAKLTTPDRKPVNAVYGFTRILQKLLREHRPEYIVAVFD
TKWITHRHMSYREYKANRKPTPDELQIQIPLIYQIIRAYHIPIYAAKGYEADDIISSLVQ
KLSDKPVEIVIVTSDKDMEQLLSPQVKIFNIKKNIMIDQEVLLKEKGIRPDQVVDVLALS
GDAVDNVPGVPGIGNKTALELIQKWGSLESILANVDHISGKKRQENLRLFTDQARLSQNL
LRLHSNIPLQIDMDTCKFHNIENTKLKKLFRKFGFNSLLTDMVATAKTEETHYKLINTPE
RFDEFFDQLTKQRIFAVDLETTNINPLKAHIVGISFSWQPKEAYYIPFMGPEGTECLNPS
TVLPKIQTILEDENIKKVGQNIKYDLLVLKNNTILLQGIVFDSMIASYLLNPIKRNHNLD
DIALEYLSYKTISISELIGLGKEQITMDQVDINKVCQYACQDADITFRLANLMEPLLKKQ
GLWHLFQMVEIPLIYALAKMEWNGICVDATILQKMSDSLTTRLQQFEKEIYTSANHEFNI
GSPKQLSEVLFEKLELPQLRRTKTGLSTDANVLTTLAWHHPLPKLVLEYRQLIKLKNTYV
DALPNMINETTGRVHTTFNQTVTATGRLSSSEPNLQNIPIRADIGRQIRSAFIPCEKDSV
FLSADYSQIELRILAHFSDDTALVTAFQQDKDIHVSVASAIYGIPIEQVTSEMRRNAKAI
NFGIIYGLNEYGLSRDTGLSLKDAHDFINAYFNLYHGVKQFKDTVLEKARSCGYVKTLFN
RKRSIPDLNSENKKRRNLAERIAVNTIIQGSAADLIKVAMNKIHAKLISGGYEAKMLLQI
HDELLFEVKENALTLTRSMIQEEMSNAVTLNVPIKVNIKTGKNWMEAE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcgattctttatcatagatggacattcacattgctatcaagcttattatgct
attacggcaaagcttacaactcctgatagaaaaccagtaaatgcagtatatggattcacc
aggatactacaaaagttactcagggagcatcgccctgaatatatagttgcggtctttgat
acaaagtggattactcacaggcacatgagttatcgtgagtataaagcaaaccgtaaaccg
acacccgatgaattacagatacaaattcctttaatttatcagataatcagagcatatcat
atacctatttatgctgctaaaggatatgaggcggatgatataatcagctctcttgtgcaa
aagctgtccgataaacctgtcgaaattgttatagtaacttcagataaagacatggaacaa
ttattaagcccacaggtaaaaatatttaatataaagaaaaacataatgattgaccaggaa
gttcttcttaaagaaaagggtatacgtccagatcaggtagtggatgttctggctctttca
ggagatgcagtagataatgtacctggagtacccggtattggcaacaaaacagcattagag
cttatccaaaaatggggatccttagaatctatccttgccaatgtcgaccatatatccgga
aaaaaaaggcaagagaatttaagattatttacagaccaagccaggctttctcaaaatctt
ctcagacttcatagtaatatccctcttcaaatcgatatggatacttgcaagtttcataac
atcgaaaatacaaaactaaaaaaattgtttaggaagtttgggtttaattcacttctgacg
gacatggttgcaacggcaaaaactgaggaaacacattataaactcataaatactcctgaa
aggtttgatgaattttttgatcaattgacaaaacaaaggatatttgctgtagatttggag
acaaccaatatcaatcctcttaaagcgcacatagtaggtatttcattctcctggcagccc
aaagaggcatattacatacctttcatggggccagaaggaactgaatgtttgaatcctagt
actgtacttcccaaaattcaaaccattttagaagatgaaaacattaagaaagttggacaa
aatattaaatatgatctcctggtactcaaaaataatactattctattacaggggatagta
ttcgactccatgattgcctcataccttcttaatcctattaaaagaaatcacaatctggat
gatatcgcattggaatatttatcttataagacaataagtatctcagaattaattggtctt
gggaaagaacaaattactatggaccaggtagatattaataaggtctgccaatatgcctgt
caggatgctgatattacattccggctggctaacctcatggaacctcttctcaaaaaacaa
gggttatggcatttattccaaatggtagaaattcctttaatttacgctttagccaagatg
gaatggaacgggatatgtgtagatgctactatcttacaaaagatgtctgatagtttaact
acaaggttacagcaattcgaaaaagaaatttatacttctgccaatcatgagttcaatatt
ggctctcccaaacaactgagtgaagttctctttgagaagcttgaattaccgcaattaaga
cgtacaaagactggtttatcaactgacgcaaatgtacttaccacgcttgcctggcatcat
ccactacctaaattagtgctggagtacaggcaacttataaagttaaaaaatacctatgtt
gacgccttgccaaatatgataaatgaaactaccggtcgagtacatacaacatttaatcaa
acggtaacagctaccggacgactgagtagtagtgaaccgaatcttcaaaatattccaatt
cgggcagatattggaaggcaaattcgaagtgcttttatcccttgcgaaaaggacagtgta
tttttatccgctgattattcacaaattgaattacgtatactcgcacacttttctgatgat
acagcattggtgacagcattccagcaggataaggatatccatgtatctgttgcatcagcc
atttatggtatcccgatagaacaggtaacatcggaaatgagaagaaatgcaaaggcaatt
aattttggaattatttatggactcaatgagtatgggctttccagagatacagggttatcc
ttaaaagatgcccatgattttattaacgcctattttaatttgtatcacggtgtcaagcag
tttaaagatacggtcttagaaaaagcaaggagttgcggatacgtaaaaacactctttaac
agaaaacgatctatacccgacctcaattctgaaaataaaaaacgaaggaaccttgcagag
cgcattgctgttaatacgatcatccagggttctgcagccgatctcataaaagttgctatg
aataaaattcacgccaaattaataagcggtggatatgaagcgaagatgctgcttcaaata
cacgatgaactactcttcgaggtaaaagagaatgccttaacattaacacgttccatgatc
caagaggaaatgagtaatgcggttacgctgaacgttccgattaaggtaaacataaaaacc
ggaaagaactggatggaagcagaatga
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