Candidatus Jettenia sp.: L3J17_14210
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Entry
L3J17_14210 CDS
T07848
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3J17_14210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jet03019
]
L3J17_14210 (recQ)
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_14210 (recQ)
Enzymes [BR:
jet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3J17_14210 (recQ)
Messenger RNA biogenesis [BR:
jet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3J17_14210 (recQ)
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3J17_14210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
RecQ-1-like_HTH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UJS17050
LinkDB
All DBs
Position
complement(3332863..3335007)
Genome browser
AA seq
714 aa
AA seq
DB search
MYKTLQKYFGYTSFYPLQEDIIKEVLAQRDAFVLMPTGGGKSLCYQLPALLFSGVTIVVS
PLIALMKDQVDGLLANGIPAIFINSSLSYSEIDAKRQSLLNNEIKILYIAPERLFMPEFL
QFLQGLKISLFAIDESHCISEWGHDFRPEYRQLEILKEKFPKVPVMALTATATPAVQKDI
ILQLKLSNCRVFKASFNRKNLYYQIKPKDNPYHQILHYLKSRKKDSGIIYCQSRKTVESL
TTSLQAEGYRVLPYHAGLPAEVRTENQERFIHDDVEIIVATIAFGMGIDKPDVRYVIHYD
LPKSIEGYYQETGRAGRDGLKSDCILFFSYADKFKIEYFINQKIDENEKLIAYKQLRDLT
NYCEGNICRRKLLLDYFGEKFDEPNCNNCDVCLEPKERFDGTIAAQKILSCIYRVGERFG
VNYIIDVLQGSKNKKVLQNRHDTIKTYGVGKEYTKSQWQAFTRELIQLGYVKLDGDKYPV
LKLNEKSQKVLLRNEKVFLTKPEEPLHIQKDERDGDYDRTLFERLRNLRKTLADKEFVPP
YIIFHDTSLKEMSTYYPQNLPDLRKINGIGEQKLHKYGEIFLKEITDYCKQHHIESKPII
HKHPEFPIKQPKTLTTQTTLELYRQHLTLEEIAQKRNLALSTIVSHIEKLILDGEDISID
GFIAPEKQQHIKQTLAELGMKFMTPVKEKLGNDYSYEEIRLVRAKMMSKCGKER
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaacattacaaaaatattttggctatacaagcttttacccccttcaggaggac
attattaaggaagtattggcacaaagagatgcctttgtccttatgccgacaggaggtggt
aaatccttatgttatcaactgcccgccctactttttagcggtgtaacgattgtcgtctct
cccctcattgccttgatgaaggatcaggtggatggattgcttgctaacggtatcccggca
atatttattaatagttcattgagctatagtgaaatcgatgcaaaaaggcaaagtttatta
aataatgaaataaagattctgtatattgcaccagaaagattatttatgccagaatttctg
cagtttttgcaagggttaaagatctccctgtttgcaattgatgaatcacactgtatttca
gaatggggacacgatttcagacccgaatatcgtcagctagagatattgaaggagaaattc
cccaaagtacctgttatggccctgacagctaccgctacacctgccgttcagaaagatatt
atcttacaattgaagttatcaaattgcagggttttcaaggcaagttttaataggaaaaat
ctgtattaccagattaaacctaaagataacccatatcatcaaatacttcactatttgaaa
agtcgaaagaaggactcgggaatcatctattgtcaaagccgtaaaaccgtggagagttta
acaacaagcttgcaagcagaaggatatcgcgtcctgccataccatgcaggtttacccgct
gaagtgagaacagaaaaccaggagcggttcatccatgacgatgttgaaattatcgtggca
acgattgccttcggtatgggcattgataaacctgatgtacgatatgtgatccactatgat
ttaccgaaaagcatcgaaggatattaccaggaaacaggacgtgcaggaagggatggatta
aaaagtgattgtatcttattctttagttacgcggataaatttaagatagagtattttatt
aatcaaaagatagatgaaaatgaaaagttgattgcatacaaacagttgagggacctaaca
aactattgtgagggcaatatttgccgaagaaagttattactggattattttggtgaaaaa
ttcgatgaaccgaattgtaacaattgtgatgtttgtttggagccaaaggaacgatttgac
ggaacaatcgctgcacaaaaaatattgtcgtgcatttatagggtaggtgaacgatttgga
gtaaattacattattgacgtcttgcaaggttcgaaaaacaaaaaggtattgcagaaccgg
cacgatacgattaagacatacggtgtagggaaagaatatacaaaatctcagtggcaggcg
tttacccgtgagttaattcaattagggtacgtaaaacttgatggggataagtatcccgtc
ttaaagctaaatgaaaagagtcaaaaagtattattacgcaacgaaaaggtatttttaaca
aaacccgaagaaccacttcacattcagaaggatgagagggatggagattacgatcgtacc
ttatttgaacgtttaagaaatctcagaaaaacacttgctgacaaagagtttgtgccccct
tatattatcttccatgataccagtcttaaagaaatgtctacctattatcctcaaaatttg
cctgatttgcggaaaataaatggtattggggaacaaaaattacataaatacggagagatt
tttctcaaggaaattactgattactgtaaacaacaccatatcgaatcgaaaccaattatc
cataaacatcccgaatttcctataaaacagccaaaaactctcactacgcaaacaacctta
gaactttaccggcaacaccttaccctcgaagaaattgcacaaaaaaggaatctggcgtta
tccaccattgtttctcatatagaaaaactcattttagatggcgaggatatttcaatagac
ggcttcatagcccctgaaaaacagcagcatatcaagcaaaccttggcagagttaggcatg
aagttcatgaccccggtaaaagaaaaacttggaaacgactactcctatgaagagataaga
ttggttagggcaaaaatgatgagtaaatgcggaaaagagagataa
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