Candidatus Jettenia sp.: L3J17_16235
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Entry
L3J17_16235 CDS
T07848
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L3J17_16235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jet03021
]
L3J17_16235
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_16235
Enzymes [BR:
jet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L3J17_16235
Transcription machinery [BR:
jet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L3J17_16235
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L3J17_16235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Tubulin_C
Motif
Other DBs
NCBI-ProteinID:
UJS17434
LinkDB
All DBs
Position
3788445..3789422
Genome browser
AA seq
325 aa
AA seq
DB search
MDVEKETLTDKYGKFIAAPFERGFGHTIGNSLRRILLSSLEGCAVVSVKINNISHEFTYI
PGIVEDVTDIILNIKNLVVKLHTDQPKLIRIEANKKGEVKAKDIITDDNVEVINEDLHIA
TLSEDVDFSVEMQVQKGRGYVTAEENESEEQEIGLIALDSMFSPVRNVRYAIEETRVGRR
TNYDRLIMEIWTNGVVSPEMALVEAAKILRKHLNPFVQYFEIGRELQQVEKRMGIESVPE
ISEEELNKKLSIPITELDLSVRASNCLETANILTVGDLVSKKEEQLLEIKNFGKTTLKEV
KKKLTQLNLTIGMPVAAKQMEKGKG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaaaaagagactttgaccgataaatatggtaaatttatagcagctcctttt
gagcgcggttttgggcatactataggaaatagcttacgtagaattttactctcttcgtta
gagggatgtgctgttgtatctgtcaaaataaataatataagtcacgagtttacttatatt
ccaggcattgttgaagatgtgacggatataatattgaatataaaaaatctcgttgttaag
ttacatacggatcagccgaaattgataagaattgaggcaaataagaagggcgaagtaaaa
gcaaaagatattattactgatgataatgtagaggttataaatgaggatctgcatattgca
acgctctcagaagatgtagattttagcgtagaaatgcaggtacaaaaagggcgtgggtat
gtgactgctgaagaaaatgaatctgaagagcaggaaattggattaatagctttagattct
atgttttctcctgttagaaatgttcgttatgctattgaagaaacacgtgtaggcagaaga
acaaattatgatagacttattatggaaatatggacaaatggtgtagtttctccagagatg
gctcttgttgaagctgctaagatcctcagaaaacatttaaatccatttgtgcagtatttt
gaaattgggagagaattacagcaagtcgagaaaaggatgggaatcgaatctgttcccgaa
atatcagaggaagaacttaataaaaagcttagtattccaataactgaattagatttatca
gtaagggcatcaaattgccttgagactgcaaatatcttaacagttggtgatctcgtttca
aaaaaagaagaacaacttctcgagattaagaattttggtaaaacaactctgaaagaagta
aagaaaaaattaacacagttgaatttaacaatcggaatgcctgtggcagctaaacaaatg
gaaaaggggaaaggataa
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