Candidatus Jettenia sp.: L3J17_16315
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Entry
L3J17_16315 CDS
T07848
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
jet
Candidatus Jettenia sp.
Pathway
jet03030
DNA replication
jet03430
Mismatch repair
jet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3J17_16315 (holA)
03430 Mismatch repair
L3J17_16315 (holA)
03440 Homologous recombination
L3J17_16315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jet03032
]
L3J17_16315 (holA)
03400 DNA repair and recombination proteins [BR:
jet03400
]
L3J17_16315 (holA)
Enzymes [BR:
jet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3J17_16315 (holA)
DNA replication proteins [BR:
jet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3J17_16315 (holA)
DNA repair and recombination proteins [BR:
jet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3J17_16315 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UJS17448
LinkDB
All DBs
Position
3801793..3802770
Genome browser
AA seq
325 aa
AA seq
DB search
MDIHQCKDKIFPIYVVFGDEEFFIRETLSSLKAHLLKDTDPTISLVEFKGDEVAGGIIFD
ELRTMPFFASRNKVVIVEEADSFVEKNKQVLERYVQAPASHSQLILVCDKWDKRIKLATL
VDKAGILVECKKLKDHQLPNWIITRTKQYKKTVTTKAAQMVAENVGNNLAILDKHIEKLS
IYLGDRTAIDEKDVEALVGIDRNRTIFELTDAVAQRNVTLALKTLSQMLIHGEDSVKIIS
LLAWQMKRLWRAKQMLNKGENESKVTSELQVIPFFAKRFFEQVKIFTEEDLTKKYALLLE
ADVKSKTSSFSMQLLLELLVYKLCV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaccagtgtaaagataagatttttccgatatatgtagtttttggagatgaa
gagttttttattcgtgagacgctttcgtcattaaaagctcatctgctcaaggataccgat
cctactatttctttagttgaatttaaaggtgacgaagttgctggagggataatatttgat
gaactgcggaccatgcctttttttgcaagtaggaataaggtagtgattgtagaagaggca
gatagttttgttgagaaaaacaagcaggtactggaaagatatgtgcaggcgcctgcgagt
cattcccagcttattcttgtatgtgataaatgggataagagaataaaattggcaaccctt
gttgataaggccgggattctggtcgaatgtaaaaaattaaaggatcatcaattgccaaac
tggataattactcgcacgaaacagtacaaaaaaacagttactaccaaagcggctcaaatg
gtagccgagaatgtaggtaataatttagccatcctggataagcatattgagaagttatct
atttatcttggcgatagaacagcgattgatgaaaaggatgtggaagcccttgttggcatt
gatagaaaccgaacgatatttgagctaaccgatgctgttgcacagagaaatgtaacatta
gctttgaaaacccttagtcaaatgctgatacacggggaagattcagtaaagatcattagt
ttgctggcgtggcaaatgaaacggttgtggagggctaagcagatgttaaataagggagaa
aatgaatcaaaagttacctcagaattacaagtgatcccattcttcgcaaagcgttttttt
gaacaggtcaagatttttaccgaggaagatctcacaaaaaagtatgccctcttgttggaa
gctgatgtgaagagtaagacaagctcctttagtatgcaactactcttagaattgctggta
tataaattatgtgtttaa
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