Jeongeupia sp. USM3: BJP62_03085
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Entry
BJP62_03085 CDS
T04552
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jeu
Jeongeupia sp. USM3
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jeu03016
]
BJP62_03085
Enzymes [BR:
jeu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJP62_03085
Transfer RNA biogenesis [BR:
jeu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJP62_03085
Prokaryotic type
BJP62_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HXXSHH
Motif
Other DBs
NCBI-ProteinID:
AOX99531
LinkDB
All DBs
Position
complement(686528..687439)
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AA seq
303 aa
AA seq
DB search
MAKRKIDGVLLLDKPFGITSNAALLKCRWLLSAEKGGHTGVLDPFATGLLPLCFGEATKF
AQRMLDADKGYRATIRLGQVSTTLDGEGEISDSGEAPTDPALIGRVLAAFVGEIDQVPPM
HSALKHQGKALYEYARQGVEIERQARRITIYSIDVVSFAGAELVIDVSCSKGTYIRTLAD
DIGRMLGCGAYLTGLRRTKTAGFSLEQSVSLDVYIAMSLDEREACLLPADTLVQDMPLLT
LDDEEVARCRNGMSIQRSSGWSAEGLFRLYAAAESGDNARFIGLGEVACDGVLRPKRLLA
TGQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcaagatcgacggcgtgctgctgctcgacaaaccgttcgggatcaccagc
aacgcagcgctgctgaagtgccgctggttgctgtcggccgagaagggcgggcacaccggc
gtgctcgatccgttcgcaaccgggcttttgcccttgtgtttcggcgaagcgaccaaattc
gcgcagcggatgctcgatgccgacaagggctaccgggcgacgatccggctcggccaggtg
tcgacgacgctcgacggcgaaggcgagatcagcgacagcggcgaggcgccgaccgatccg
gcgctgatcgggcgtgtgctggcggctttcgtcggcgagatcgaccaggtgccgccgatg
cactcggcgctcaagcatcagggcaaggcgctgtacgagtacgcgcgccagggggtcgag
atcgagcgccaggcgcgccggatcacgatctattcgatcgacgtggtgtcgtttgctggt
gccgagctggtcatcgacgtttcgtgctcgaagggaacatacatccgcacgctggccgac
gacatcggacggatgctgggttgcggcgcctacctgacgggcctgcgccggaccaaaacc
gccgggttttcgctcgaacagtccgtgtcgctcgatgtctatatcgcgatgtcgctcgac
gaacgcgaggcctgtctgctgccggccgatacgctggtgcaggacatgccgctgctgacg
cttgacgacgaggaagtcgcccgctgccgcaacggcatgagcatccagcgctcgtcgggc
tggtcggccgaggggttgttccggctttacgctgcggccgaaagcggcgataatgcgcga
ttcatcggtttgggcgaagtggcatgcgatggtgtgctgcggcccaaacgtctgctggcc
actggccagtga
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